Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14555 | 43888;43889;43890 | chr2:178632231;178632230;178632229 | chr2:179496958;179496957;179496956 |
N2AB | 12914 | 38965;38966;38967 | chr2:178632231;178632230;178632229 | chr2:179496958;179496957;179496956 |
N2A | 11987 | 36184;36185;36186 | chr2:178632231;178632230;178632229 | chr2:179496958;179496957;179496956 |
N2B | 5490 | 16693;16694;16695 | chr2:178632231;178632230;178632229 | chr2:179496958;179496957;179496956 |
Novex-1 | 5615 | 17068;17069;17070 | chr2:178632231;178632230;178632229 | chr2:179496958;179496957;179496956 |
Novex-2 | 5682 | 17269;17270;17271 | chr2:178632231;178632230;178632229 | chr2:179496958;179496957;179496956 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/L | rs1452980014 | -0.643 | 0.002 | N | 0.309 | 0.215 | 0.459463830659 | gnomAD-2.1.1 | 4.2E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 1.72771E-04 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/A | 0.9526 | likely_pathogenic | 0.9235 | pathogenic | -2.444 | Highly Destabilizing | 0.617 | D | 0.743 | deleterious | None | None | None | None | N |
F/C | 0.7227 | likely_pathogenic | 0.6164 | pathogenic | -2.008 | Highly Destabilizing | 0.99 | D | 0.831 | deleterious | N | 0.507700699 | None | None | N |
F/D | 0.995 | likely_pathogenic | 0.9933 | pathogenic | -3.073 | Highly Destabilizing | 0.972 | D | 0.861 | deleterious | None | None | None | None | N |
F/E | 0.9897 | likely_pathogenic | 0.9853 | pathogenic | -2.819 | Highly Destabilizing | 0.92 | D | 0.86 | deleterious | None | None | None | None | N |
F/G | 0.986 | likely_pathogenic | 0.978 | pathogenic | -2.937 | Highly Destabilizing | 0.92 | D | 0.833 | deleterious | None | None | None | None | N |
F/H | 0.9458 | likely_pathogenic | 0.9264 | pathogenic | -1.988 | Destabilizing | 0.992 | D | 0.773 | deleterious | None | None | None | None | N |
F/I | 0.3019 | likely_benign | 0.2187 | benign | -0.832 | Destabilizing | 0.002 | N | 0.346 | neutral | N | 0.350672793 | None | None | N |
F/K | 0.9841 | likely_pathogenic | 0.9779 | pathogenic | -2.257 | Highly Destabilizing | 0.92 | D | 0.854 | deleterious | None | None | None | None | N |
F/L | 0.8584 | likely_pathogenic | 0.7528 | pathogenic | -0.832 | Destabilizing | 0.002 | N | 0.309 | neutral | N | 0.471083069 | None | None | N |
F/M | 0.661 | likely_pathogenic | 0.5337 | ambiguous | -0.8 | Destabilizing | 0.85 | D | 0.695 | prob.neutral | None | None | None | None | N |
F/N | 0.9821 | likely_pathogenic | 0.9747 | pathogenic | -2.906 | Highly Destabilizing | 0.972 | D | 0.859 | deleterious | None | None | None | None | N |
F/P | 0.9988 | likely_pathogenic | 0.9983 | pathogenic | -1.383 | Destabilizing | 0.972 | D | 0.853 | deleterious | None | None | None | None | N |
F/Q | 0.9781 | likely_pathogenic | 0.9684 | pathogenic | -2.658 | Highly Destabilizing | 0.972 | D | 0.86 | deleterious | None | None | None | None | N |
F/R | 0.9656 | likely_pathogenic | 0.9538 | pathogenic | -2.124 | Highly Destabilizing | 0.92 | D | 0.856 | deleterious | None | None | None | None | N |
F/S | 0.9542 | likely_pathogenic | 0.9284 | pathogenic | -3.496 | Highly Destabilizing | 0.896 | D | 0.833 | deleterious | N | 0.506839445 | None | None | N |
F/T | 0.9512 | likely_pathogenic | 0.9313 | pathogenic | -3.105 | Highly Destabilizing | 0.617 | D | 0.818 | deleterious | None | None | None | None | N |
F/V | 0.4022 | ambiguous | 0.3021 | benign | -1.383 | Destabilizing | 0.201 | N | 0.618 | neutral | N | 0.49008974 | None | None | N |
F/W | 0.717 | likely_pathogenic | 0.622 | pathogenic | -0.285 | Destabilizing | 0.992 | D | 0.671 | neutral | None | None | None | None | N |
F/Y | 0.4349 | ambiguous | 0.3423 | ambiguous | -0.674 | Destabilizing | 0.712 | D | 0.637 | neutral | N | 0.511449873 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.