Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14590 | 43993;43994;43995 | chr2:178631280;178631279;178631278 | chr2:179496007;179496006;179496005 |
N2AB | 12949 | 39070;39071;39072 | chr2:178631280;178631279;178631278 | chr2:179496007;179496006;179496005 |
N2A | 12022 | 36289;36290;36291 | chr2:178631280;178631279;178631278 | chr2:179496007;179496006;179496005 |
N2B | 5525 | 16798;16799;16800 | chr2:178631280;178631279;178631278 | chr2:179496007;179496006;179496005 |
Novex-1 | 5650 | 17173;17174;17175 | chr2:178631280;178631279;178631278 | chr2:179496007;179496006;179496005 |
Novex-2 | 5717 | 17374;17375;17376 | chr2:178631280;178631279;178631278 | chr2:179496007;179496006;179496005 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/R | None | None | 0.028 | N | 0.368 | 0.205 | 0.473538153929 | gnomAD-4.0.0 | 7.54763E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 1.93065E-05 | 0 | 9.00455E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | 0.1381 | likely_benign | 0.1382 | benign | -0.6 | Destabilizing | 0.454 | N | 0.41 | neutral | N | 0.456459362 | None | None | N |
G/C | 0.2704 | likely_benign | 0.3196 | benign | -0.899 | Destabilizing | 0.998 | D | 0.563 | neutral | None | None | None | None | N |
G/D | 0.2196 | likely_benign | 0.2765 | benign | -0.786 | Destabilizing | 0.842 | D | 0.496 | neutral | None | None | None | None | N |
G/E | 0.16 | likely_benign | 0.1949 | benign | -0.905 | Destabilizing | 0.801 | D | 0.503 | neutral | N | 0.411654099 | None | None | N |
G/F | 0.6734 | likely_pathogenic | 0.6998 | pathogenic | -1.107 | Destabilizing | 0.974 | D | 0.599 | neutral | None | None | None | None | N |
G/H | 0.4072 | ambiguous | 0.4365 | ambiguous | -0.976 | Destabilizing | 0.998 | D | 0.527 | neutral | None | None | None | None | N |
G/I | 0.3391 | likely_benign | 0.3574 | ambiguous | -0.466 | Destabilizing | 0.728 | D | 0.531 | neutral | None | None | None | None | N |
G/K | 0.2811 | likely_benign | 0.2978 | benign | -1.052 | Destabilizing | 0.728 | D | 0.512 | neutral | None | None | None | None | N |
G/L | 0.4632 | ambiguous | 0.4901 | ambiguous | -0.466 | Destabilizing | 0.728 | D | 0.526 | neutral | None | None | None | None | N |
G/M | 0.5307 | ambiguous | 0.547 | ambiguous | -0.396 | Destabilizing | 0.974 | D | 0.564 | neutral | None | None | None | None | N |
G/N | 0.3175 | likely_benign | 0.3554 | ambiguous | -0.674 | Destabilizing | 0.842 | D | 0.498 | neutral | None | None | None | None | N |
G/P | 0.9483 | likely_pathogenic | 0.9627 | pathogenic | -0.472 | Destabilizing | 0.974 | D | 0.547 | neutral | None | None | None | None | N |
G/Q | 0.2599 | likely_benign | 0.2827 | benign | -0.938 | Destabilizing | 0.949 | D | 0.563 | neutral | None | None | None | None | N |
G/R | 0.1841 | likely_benign | 0.2005 | benign | -0.634 | Destabilizing | 0.028 | N | 0.368 | neutral | N | 0.376109605 | None | None | N |
G/S | 0.1027 | likely_benign | 0.1088 | benign | -0.909 | Destabilizing | 0.067 | N | 0.296 | neutral | None | None | None | None | N |
G/T | 0.1768 | likely_benign | 0.1769 | benign | -0.951 | Destabilizing | 0.067 | N | 0.365 | neutral | None | None | None | None | N |
G/V | 0.2019 | likely_benign | 0.2144 | benign | -0.472 | Destabilizing | 0.051 | N | 0.402 | neutral | N | 0.34102307 | None | None | N |
G/W | 0.4667 | ambiguous | 0.5132 | ambiguous | -1.324 | Destabilizing | 0.998 | D | 0.577 | neutral | None | None | None | None | N |
G/Y | 0.5225 | ambiguous | 0.5632 | ambiguous | -0.955 | Destabilizing | 0.991 | D | 0.587 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.