Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14615 | 44068;44069;44070 | chr2:178631205;178631204;178631203 | chr2:179495932;179495931;179495930 |
N2AB | 12974 | 39145;39146;39147 | chr2:178631205;178631204;178631203 | chr2:179495932;179495931;179495930 |
N2A | 12047 | 36364;36365;36366 | chr2:178631205;178631204;178631203 | chr2:179495932;179495931;179495930 |
N2B | 5550 | 16873;16874;16875 | chr2:178631205;178631204;178631203 | chr2:179495932;179495931;179495930 |
Novex-1 | 5675 | 17248;17249;17250 | chr2:178631205;178631204;178631203 | chr2:179495932;179495931;179495930 |
Novex-2 | 5742 | 17449;17450;17451 | chr2:178631205;178631204;178631203 | chr2:179495932;179495931;179495930 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/L | rs1281092990 | 0.005 | 0.92 | D | 0.624 | 0.615 | 0.692581660658 | gnomAD-2.1.1 | 4.04E-06 | None | None | None | None | N | None | 6.46E-05 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
P/L | rs1281092990 | 0.005 | 0.92 | D | 0.624 | 0.615 | 0.692581660658 | gnomAD-4.0.0 | 2.05345E-06 | None | None | None | None | N | None | 2.989E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 1.79925E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.1032 | likely_benign | 0.0985 | benign | -0.501 | Destabilizing | 0.826 | D | 0.428 | neutral | D | 0.660822796 | None | None | N |
P/C | 0.7435 | likely_pathogenic | 0.7333 | pathogenic | -0.499 | Destabilizing | 0.999 | D | 0.603 | neutral | None | None | None | None | N |
P/D | 0.4085 | ambiguous | 0.3661 | ambiguous | -0.429 | Destabilizing | 0.02 | N | 0.22 | neutral | None | None | None | None | N |
P/E | 0.2929 | likely_benign | 0.2509 | benign | -0.527 | Destabilizing | 0.17 | N | 0.245 | neutral | None | None | None | None | N |
P/F | 0.6484 | likely_pathogenic | 0.616 | pathogenic | -0.688 | Destabilizing | 0.997 | D | 0.619 | neutral | None | None | None | None | N |
P/G | 0.48 | ambiguous | 0.4525 | ambiguous | -0.655 | Destabilizing | 0.969 | D | 0.51 | neutral | None | None | None | None | N |
P/H | 0.2817 | likely_benign | 0.246 | benign | -0.263 | Destabilizing | 0.991 | D | 0.585 | neutral | None | None | None | None | N |
P/I | 0.4168 | ambiguous | 0.3989 | ambiguous | -0.237 | Destabilizing | 0.997 | D | 0.623 | neutral | None | None | None | None | N |
P/K | 0.3462 | ambiguous | 0.3141 | benign | -0.479 | Destabilizing | 0.884 | D | 0.459 | neutral | None | None | None | None | N |
P/L | 0.1648 | likely_benign | 0.1611 | benign | -0.237 | Destabilizing | 0.92 | D | 0.624 | neutral | D | 0.622151802 | None | None | N |
P/M | 0.4467 | ambiguous | 0.4388 | ambiguous | -0.325 | Destabilizing | 0.999 | D | 0.575 | neutral | None | None | None | None | N |
P/N | 0.4129 | ambiguous | 0.3669 | ambiguous | -0.183 | Destabilizing | 0.939 | D | 0.565 | neutral | None | None | None | None | N |
P/Q | 0.2425 | likely_benign | 0.2079 | benign | -0.406 | Destabilizing | 0.31 | N | 0.291 | neutral | D | 0.533742519 | None | None | N |
P/R | 0.2534 | likely_benign | 0.23 | benign | 0.015 | Stabilizing | 0.976 | D | 0.599 | neutral | D | 0.589371977 | None | None | N |
P/S | 0.1602 | likely_benign | 0.1449 | benign | -0.513 | Destabilizing | 0.92 | D | 0.445 | neutral | D | 0.576789001 | None | None | N |
P/T | 0.1227 | likely_benign | 0.1225 | benign | -0.51 | Destabilizing | 0.959 | D | 0.506 | neutral | D | 0.582348422 | None | None | N |
P/V | 0.304 | likely_benign | 0.2961 | benign | -0.29 | Destabilizing | 0.969 | D | 0.578 | neutral | None | None | None | None | N |
P/W | 0.8008 | likely_pathogenic | 0.775 | pathogenic | -0.804 | Destabilizing | 0.999 | D | 0.641 | neutral | None | None | None | None | N |
P/Y | 0.6129 | likely_pathogenic | 0.5727 | pathogenic | -0.496 | Destabilizing | 0.997 | D | 0.621 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.