Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14616 | 44071;44072;44073 | chr2:178631202;178631201;178631200 | chr2:179495929;179495928;179495927 |
N2AB | 12975 | 39148;39149;39150 | chr2:178631202;178631201;178631200 | chr2:179495929;179495928;179495927 |
N2A | 12048 | 36367;36368;36369 | chr2:178631202;178631201;178631200 | chr2:179495929;179495928;179495927 |
N2B | 5551 | 16876;16877;16878 | chr2:178631202;178631201;178631200 | chr2:179495929;179495928;179495927 |
Novex-1 | 5676 | 17251;17252;17253 | chr2:178631202;178631201;178631200 | chr2:179495929;179495928;179495927 |
Novex-2 | 5743 | 17452;17453;17454 | chr2:178631202;178631201;178631200 | chr2:179495929;179495928;179495927 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | None | None | 0.999 | D | 0.61 | 0.794 | 0.780250927539 | gnomAD-4.0.0 | 6.16008E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 6.29729E-06 | 0 | 3.31576E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.4967 | ambiguous | 0.595 | pathogenic | -1.854 | Destabilizing | 0.999 | D | 0.61 | neutral | D | 0.685183746 | None | None | N |
V/C | 0.9151 | likely_pathogenic | 0.9414 | pathogenic | -1.047 | Destabilizing | 1.0 | D | 0.777 | deleterious | None | None | None | None | N |
V/D | 0.9586 | likely_pathogenic | 0.9826 | pathogenic | -2.247 | Highly Destabilizing | 1.0 | D | 0.839 | deleterious | None | None | None | None | N |
V/E | 0.8955 | likely_pathogenic | 0.9499 | pathogenic | -2.119 | Highly Destabilizing | 1.0 | D | 0.841 | deleterious | D | 0.821604042 | None | None | N |
V/F | 0.6038 | likely_pathogenic | 0.7266 | pathogenic | -1.276 | Destabilizing | 1.0 | D | 0.797 | deleterious | None | None | None | None | N |
V/G | 0.6251 | likely_pathogenic | 0.7492 | pathogenic | -2.283 | Highly Destabilizing | 1.0 | D | 0.842 | deleterious | D | 0.708100418 | None | None | N |
V/H | 0.9821 | likely_pathogenic | 0.9915 | pathogenic | -1.92 | Destabilizing | 1.0 | D | 0.851 | deleterious | None | None | None | None | N |
V/I | 0.1349 | likely_benign | 0.1447 | benign | -0.701 | Destabilizing | 0.998 | D | 0.59 | neutral | None | None | None | None | N |
V/K | 0.9555 | likely_pathogenic | 0.9785 | pathogenic | -1.601 | Destabilizing | 1.0 | D | 0.844 | deleterious | None | None | None | None | N |
V/L | 0.5436 | ambiguous | 0.6539 | pathogenic | -0.701 | Destabilizing | 0.997 | D | 0.642 | neutral | D | 0.638315239 | None | None | N |
V/M | 0.4684 | ambiguous | 0.5844 | pathogenic | -0.437 | Destabilizing | 1.0 | D | 0.757 | deleterious | D | 0.729914968 | None | None | N |
V/N | 0.9335 | likely_pathogenic | 0.9672 | pathogenic | -1.64 | Destabilizing | 1.0 | D | 0.857 | deleterious | None | None | None | None | N |
V/P | 0.9382 | likely_pathogenic | 0.9645 | pathogenic | -1.056 | Destabilizing | 1.0 | D | 0.845 | deleterious | None | None | None | None | N |
V/Q | 0.9157 | likely_pathogenic | 0.9597 | pathogenic | -1.651 | Destabilizing | 1.0 | D | 0.861 | deleterious | None | None | None | None | N |
V/R | 0.9278 | likely_pathogenic | 0.9643 | pathogenic | -1.215 | Destabilizing | 1.0 | D | 0.861 | deleterious | None | None | None | None | N |
V/S | 0.7247 | likely_pathogenic | 0.8175 | pathogenic | -2.155 | Highly Destabilizing | 1.0 | D | 0.839 | deleterious | None | None | None | None | N |
V/T | 0.605 | likely_pathogenic | 0.6871 | pathogenic | -1.905 | Destabilizing | 0.999 | D | 0.667 | neutral | None | None | None | None | N |
V/W | 0.9893 | likely_pathogenic | 0.9952 | pathogenic | -1.691 | Destabilizing | 1.0 | D | 0.838 | deleterious | None | None | None | None | N |
V/Y | 0.9581 | likely_pathogenic | 0.9793 | pathogenic | -1.322 | Destabilizing | 1.0 | D | 0.79 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.