Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14631 | 44116;44117;44118 | chr2:178631157;178631156;178631155 | chr2:179495884;179495883;179495882 |
N2AB | 12990 | 39193;39194;39195 | chr2:178631157;178631156;178631155 | chr2:179495884;179495883;179495882 |
N2A | 12063 | 36412;36413;36414 | chr2:178631157;178631156;178631155 | chr2:179495884;179495883;179495882 |
N2B | 5566 | 16921;16922;16923 | chr2:178631157;178631156;178631155 | chr2:179495884;179495883;179495882 |
Novex-1 | 5691 | 17296;17297;17298 | chr2:178631157;178631156;178631155 | chr2:179495884;179495883;179495882 |
Novex-2 | 5758 | 17497;17498;17499 | chr2:178631157;178631156;178631155 | chr2:179495884;179495883;179495882 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/T | None | None | 0.012 | N | 0.521 | 0.082 | 0.306695030598 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
A/V | rs1237863283 | None | None | N | 0.181 | 0.183 | 0.0920862733494 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
A/V | rs1237863283 | None | None | N | 0.181 | 0.183 | 0.0920862733494 | gnomAD-4.0.0 | 1.23982E-06 | None | None | None | None | N | None | 1.33561E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 8.47759E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.438 | ambiguous | 0.4446 | ambiguous | -1.029 | Destabilizing | 0.001 | N | 0.383 | neutral | None | None | None | None | N |
A/D | 0.4286 | ambiguous | 0.4002 | ambiguous | -1.397 | Destabilizing | 0.295 | N | 0.669 | neutral | N | 0.495859179 | None | None | N |
A/E | 0.3321 | likely_benign | 0.3092 | benign | -1.366 | Destabilizing | 0.136 | N | 0.646 | neutral | None | None | None | None | N |
A/F | 0.2752 | likely_benign | 0.2612 | benign | -0.965 | Destabilizing | 0.214 | N | 0.667 | neutral | None | None | None | None | N |
A/G | 0.2161 | likely_benign | 0.2144 | benign | -1.351 | Destabilizing | 0.106 | N | 0.553 | neutral | N | 0.487577059 | None | None | N |
A/H | 0.5663 | likely_pathogenic | 0.5483 | ambiguous | -1.65 | Destabilizing | 0.864 | D | 0.622 | neutral | None | None | None | None | N |
A/I | 0.1445 | likely_benign | 0.1348 | benign | -0.226 | Destabilizing | None | N | 0.344 | neutral | None | None | None | None | N |
A/K | 0.5242 | ambiguous | 0.5055 | ambiguous | -1.338 | Destabilizing | 0.136 | N | 0.643 | neutral | None | None | None | None | N |
A/L | 0.1745 | likely_benign | 0.1719 | benign | -0.226 | Destabilizing | 0.007 | N | 0.44 | neutral | None | None | None | None | N |
A/M | 0.1933 | likely_benign | 0.1793 | benign | -0.21 | Destabilizing | 0.214 | N | 0.678 | prob.neutral | None | None | None | None | N |
A/N | 0.35 | ambiguous | 0.3274 | benign | -1.158 | Destabilizing | 0.628 | D | 0.661 | neutral | None | None | None | None | N |
A/P | 0.7351 | likely_pathogenic | 0.757 | pathogenic | -0.446 | Destabilizing | 0.295 | N | 0.681 | prob.neutral | N | 0.469136222 | None | None | N |
A/Q | 0.4511 | ambiguous | 0.4326 | ambiguous | -1.208 | Destabilizing | 0.628 | D | 0.679 | prob.neutral | None | None | None | None | N |
A/R | 0.4531 | ambiguous | 0.4281 | ambiguous | -1.127 | Destabilizing | 0.356 | N | 0.673 | neutral | None | None | None | None | N |
A/S | 0.1178 | likely_benign | 0.114 | benign | -1.572 | Destabilizing | 0.055 | N | 0.539 | neutral | N | 0.455436738 | None | None | N |
A/T | 0.0856 | likely_benign | 0.0792 | benign | -1.432 | Destabilizing | 0.012 | N | 0.521 | neutral | N | 0.441900416 | None | None | N |
A/V | 0.078 | likely_benign | 0.0755 | benign | -0.446 | Destabilizing | None | N | 0.181 | neutral | N | 0.306764423 | None | None | N |
A/W | 0.7445 | likely_pathogenic | 0.74 | pathogenic | -1.436 | Destabilizing | 0.864 | D | 0.669 | neutral | None | None | None | None | N |
A/Y | 0.4385 | ambiguous | 0.4386 | ambiguous | -0.989 | Destabilizing | 0.356 | N | 0.663 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.