Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14643 | 44152;44153;44154 | chr2:178631121;178631120;178631119 | chr2:179495848;179495847;179495846 |
N2AB | 13002 | 39229;39230;39231 | chr2:178631121;178631120;178631119 | chr2:179495848;179495847;179495846 |
N2A | 12075 | 36448;36449;36450 | chr2:178631121;178631120;178631119 | chr2:179495848;179495847;179495846 |
N2B | 5578 | 16957;16958;16959 | chr2:178631121;178631120;178631119 | chr2:179495848;179495847;179495846 |
Novex-1 | 5703 | 17332;17333;17334 | chr2:178631121;178631120;178631119 | chr2:179495848;179495847;179495846 |
Novex-2 | 5770 | 17533;17534;17535 | chr2:178631121;178631120;178631119 | chr2:179495848;179495847;179495846 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/N | None | None | 0.896 | N | 0.677 | 0.271 | 0.762871968251 | gnomAD-4.0.0 | 2.05317E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.69878E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.5122 | ambiguous | 0.5637 | ambiguous | -2.845 | Highly Destabilizing | 0.002 | N | 0.391 | neutral | None | None | None | None | N |
I/C | 0.7276 | likely_pathogenic | 0.7697 | pathogenic | -1.958 | Destabilizing | 0.972 | D | 0.632 | neutral | None | None | None | None | N |
I/D | 0.8412 | likely_pathogenic | 0.8672 | pathogenic | -3.161 | Highly Destabilizing | 0.92 | D | 0.689 | prob.neutral | None | None | None | None | N |
I/E | 0.6644 | likely_pathogenic | 0.7024 | pathogenic | -2.987 | Highly Destabilizing | 0.617 | D | 0.677 | prob.neutral | None | None | None | None | N |
I/F | 0.1528 | likely_benign | 0.1771 | benign | -1.742 | Destabilizing | 0.81 | D | 0.667 | neutral | D | 0.549872353 | None | None | N |
I/G | 0.8069 | likely_pathogenic | 0.8457 | pathogenic | -3.326 | Highly Destabilizing | 0.447 | N | 0.671 | neutral | None | None | None | None | N |
I/H | 0.4455 | ambiguous | 0.5088 | ambiguous | -2.648 | Highly Destabilizing | 0.992 | D | 0.646 | neutral | None | None | None | None | N |
I/K | 0.4301 | ambiguous | 0.5141 | ambiguous | -2.319 | Highly Destabilizing | 0.617 | D | 0.679 | prob.neutral | None | None | None | None | N |
I/L | 0.1276 | likely_benign | 0.1417 | benign | -1.457 | Destabilizing | 0.099 | N | 0.411 | neutral | N | 0.493920515 | None | None | N |
I/M | 0.1456 | likely_benign | 0.1575 | benign | -1.259 | Destabilizing | 0.81 | D | 0.673 | neutral | D | 0.55891321 | None | None | N |
I/N | 0.3859 | ambiguous | 0.435 | ambiguous | -2.518 | Highly Destabilizing | 0.896 | D | 0.677 | prob.neutral | N | 0.513409637 | None | None | N |
I/P | 0.9553 | likely_pathogenic | 0.971 | pathogenic | -1.902 | Destabilizing | 0.92 | D | 0.68 | prob.neutral | None | None | None | None | N |
I/Q | 0.4883 | ambiguous | 0.5408 | ambiguous | -2.475 | Highly Destabilizing | 0.92 | D | 0.671 | neutral | None | None | None | None | N |
I/R | 0.3112 | likely_benign | 0.3889 | ambiguous | -1.804 | Destabilizing | 0.92 | D | 0.672 | neutral | None | None | None | None | N |
I/S | 0.3982 | ambiguous | 0.4411 | ambiguous | -3.162 | Highly Destabilizing | 0.379 | N | 0.659 | neutral | N | 0.507929336 | None | None | N |
I/T | 0.2716 | likely_benign | 0.3153 | benign | -2.87 | Highly Destabilizing | 0.007 | N | 0.386 | neutral | N | 0.456081337 | None | None | N |
I/V | 0.0959 | likely_benign | 0.099 | benign | -1.902 | Destabilizing | 0.002 | N | 0.177 | neutral | N | 0.468000746 | None | None | N |
I/W | 0.7591 | likely_pathogenic | 0.8034 | pathogenic | -2.114 | Highly Destabilizing | 0.992 | D | 0.668 | neutral | None | None | None | None | N |
I/Y | 0.4415 | ambiguous | 0.5032 | ambiguous | -1.914 | Destabilizing | 0.92 | D | 0.653 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.