Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 1468 | 4627;4628;4629 | chr2:178777782;178777781;178777780 | chr2:179642509;179642508;179642507 |
N2AB | 1468 | 4627;4628;4629 | chr2:178777782;178777781;178777780 | chr2:179642509;179642508;179642507 |
N2A | 1468 | 4627;4628;4629 | chr2:178777782;178777781;178777780 | chr2:179642509;179642508;179642507 |
N2B | 1422 | 4489;4490;4491 | chr2:178777782;178777781;178777780 | chr2:179642509;179642508;179642507 |
Novex-1 | 1422 | 4489;4490;4491 | chr2:178777782;178777781;178777780 | chr2:179642509;179642508;179642507 |
Novex-2 | 1422 | 4489;4490;4491 | chr2:178777782;178777781;178777780 | chr2:179642509;179642508;179642507 |
Novex-3 | 1468 | 4627;4628;4629 | chr2:178777782;178777781;178777780 | chr2:179642509;179642508;179642507 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
C/S | None | None | 0.99 | N | 0.579 | 0.629 | 0.72213654127 | gnomAD-4.0.0 | 2.40064E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 7.32654E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
C/A | 0.7549 | likely_pathogenic | 0.7543 | pathogenic | -1.712 | Destabilizing | 0.964 | D | 0.461 | neutral | None | None | None | None | I |
C/D | 0.9904 | likely_pathogenic | 0.9898 | pathogenic | -0.887 | Destabilizing | 0.999 | D | 0.665 | neutral | None | None | None | None | I |
C/E | 0.9923 | likely_pathogenic | 0.9918 | pathogenic | -0.735 | Destabilizing | 0.999 | D | 0.669 | neutral | None | None | None | None | I |
C/F | 0.7414 | likely_pathogenic | 0.7338 | pathogenic | -1.039 | Destabilizing | 0.997 | D | 0.606 | neutral | N | 0.507747866 | None | None | I |
C/G | 0.673 | likely_pathogenic | 0.6764 | pathogenic | -2.046 | Highly Destabilizing | 0.999 | D | 0.653 | neutral | N | 0.503918272 | None | None | I |
C/H | 0.9624 | likely_pathogenic | 0.9598 | pathogenic | -2.177 | Highly Destabilizing | 1.0 | D | 0.63 | neutral | None | None | None | None | I |
C/I | 0.6707 | likely_pathogenic | 0.6635 | pathogenic | -0.838 | Destabilizing | 0.971 | D | 0.529 | neutral | None | None | None | None | I |
C/K | 0.9917 | likely_pathogenic | 0.9912 | pathogenic | -1.129 | Destabilizing | 0.999 | D | 0.663 | neutral | None | None | None | None | I |
C/L | 0.7281 | likely_pathogenic | 0.7242 | pathogenic | -0.838 | Destabilizing | 0.931 | D | 0.494 | neutral | None | None | None | None | I |
C/M | 0.8693 | likely_pathogenic | 0.8635 | pathogenic | 0.006 | Stabilizing | 0.998 | D | 0.577 | neutral | None | None | None | None | I |
C/N | 0.9496 | likely_pathogenic | 0.9473 | pathogenic | -1.301 | Destabilizing | 0.999 | D | 0.675 | prob.neutral | None | None | None | None | I |
C/P | 0.9972 | likely_pathogenic | 0.9973 | pathogenic | -1.104 | Destabilizing | 0.999 | D | 0.667 | neutral | None | None | None | None | I |
C/Q | 0.9719 | likely_pathogenic | 0.9708 | pathogenic | -1.101 | Destabilizing | 0.999 | D | 0.669 | neutral | None | None | None | None | I |
C/R | 0.9487 | likely_pathogenic | 0.9453 | pathogenic | -1.18 | Destabilizing | 0.999 | D | 0.677 | prob.neutral | N | 0.498798882 | None | None | I |
C/S | 0.7468 | likely_pathogenic | 0.7445 | pathogenic | -1.768 | Destabilizing | 0.99 | D | 0.579 | neutral | N | 0.495865794 | None | None | I |
C/T | 0.7558 | likely_pathogenic | 0.7495 | pathogenic | -1.432 | Destabilizing | 0.985 | D | 0.588 | neutral | None | None | None | None | I |
C/V | 0.5226 | ambiguous | 0.513 | ambiguous | -1.104 | Destabilizing | 0.469 | N | 0.369 | neutral | None | None | None | None | I |
C/W | 0.9706 | likely_pathogenic | 0.969 | pathogenic | -1.191 | Destabilizing | 1.0 | D | 0.583 | neutral | D | 0.583010668 | None | None | I |
C/Y | 0.8801 | likely_pathogenic | 0.8759 | pathogenic | -1.097 | Destabilizing | 0.999 | D | 0.608 | neutral | N | 0.508048647 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.