Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14701 | 44326;44327;44328 | chr2:178630857;178630856;178630855 | chr2:179495584;179495583;179495582 |
N2AB | 13060 | 39403;39404;39405 | chr2:178630857;178630856;178630855 | chr2:179495584;179495583;179495582 |
N2A | 12133 | 36622;36623;36624 | chr2:178630857;178630856;178630855 | chr2:179495584;179495583;179495582 |
N2B | 5636 | 17131;17132;17133 | chr2:178630857;178630856;178630855 | chr2:179495584;179495583;179495582 |
Novex-1 | 5761 | 17506;17507;17508 | chr2:178630857;178630856;178630855 | chr2:179495584;179495583;179495582 |
Novex-2 | 5828 | 17707;17708;17709 | chr2:178630857;178630856;178630855 | chr2:179495584;179495583;179495582 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | rs1286396788 | None | 0.012 | N | 0.267 | 0.135 | 0.178374595973 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
D/A | rs1286396788 | None | 0.012 | N | 0.267 | 0.135 | 0.178374595973 | gnomAD-4.0.0 | 6.57341E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.47046E-05 | 0 | 0 |
D/G | None | None | 0.058 | N | 0.276 | 0.146 | 0.154104182512 | gnomAD-4.0.0 | 1.5922E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.8603E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.1193 | likely_benign | 0.1205 | benign | -0.226 | Destabilizing | 0.012 | N | 0.267 | neutral | N | 0.432743017 | None | None | N |
D/C | 0.5712 | likely_pathogenic | 0.5446 | ambiguous | 0.093 | Stabilizing | 0.869 | D | 0.495 | neutral | None | None | None | None | N |
D/E | 0.088 | likely_benign | 0.0823 | benign | -0.352 | Destabilizing | None | N | 0.113 | neutral | N | 0.395282638 | None | None | N |
D/F | 0.5675 | likely_pathogenic | 0.5522 | ambiguous | -0.249 | Destabilizing | 0.637 | D | 0.444 | neutral | None | None | None | None | N |
D/G | 0.127 | likely_benign | 0.121 | benign | -0.417 | Destabilizing | 0.058 | N | 0.276 | neutral | N | 0.43335908 | None | None | N |
D/H | 0.2705 | likely_benign | 0.2587 | benign | -0.132 | Destabilizing | 0.303 | N | 0.351 | neutral | N | 0.447175988 | None | None | N |
D/I | 0.2931 | likely_benign | 0.3023 | benign | 0.226 | Stabilizing | 0.366 | N | 0.547 | neutral | None | None | None | None | N |
D/K | 0.1918 | likely_benign | 0.2158 | benign | 0.339 | Stabilizing | 0.016 | N | 0.271 | neutral | None | None | None | None | N |
D/L | 0.3167 | likely_benign | 0.3316 | benign | 0.226 | Stabilizing | 0.075 | N | 0.417 | neutral | None | None | None | None | N |
D/M | 0.49 | ambiguous | 0.4979 | ambiguous | 0.36 | Stabilizing | 0.869 | D | 0.417 | neutral | None | None | None | None | N |
D/N | 0.1048 | likely_benign | 0.0944 | benign | 0.092 | Stabilizing | 0.058 | N | 0.331 | neutral | N | 0.445227066 | None | None | N |
D/P | 0.4177 | ambiguous | 0.4806 | ambiguous | 0.097 | Stabilizing | 0.366 | N | 0.426 | neutral | None | None | None | None | N |
D/Q | 0.2243 | likely_benign | 0.241 | benign | 0.107 | Stabilizing | 0.039 | N | 0.327 | neutral | None | None | None | None | N |
D/R | 0.2829 | likely_benign | 0.2953 | benign | 0.464 | Stabilizing | 0.001 | N | 0.188 | neutral | None | None | None | None | N |
D/S | 0.1154 | likely_benign | 0.1101 | benign | -0.015 | Destabilizing | 0.003 | N | 0.236 | neutral | None | None | None | None | N |
D/T | 0.1844 | likely_benign | 0.1916 | benign | 0.129 | Stabilizing | 0.039 | N | 0.327 | neutral | None | None | None | None | N |
D/V | 0.1734 | likely_benign | 0.1776 | benign | 0.097 | Stabilizing | 0.177 | N | 0.464 | neutral | N | 0.436253628 | None | None | N |
D/W | 0.8139 | likely_pathogenic | 0.8079 | pathogenic | -0.15 | Destabilizing | 0.869 | D | 0.543 | neutral | None | None | None | None | N |
D/Y | 0.2062 | likely_benign | 0.1938 | benign | -0.016 | Destabilizing | 0.57 | D | 0.446 | neutral | N | 0.447704949 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.