Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14710 | 44353;44354;44355 | chr2:178630830;178630829;178630828 | chr2:179495557;179495556;179495555 |
N2AB | 13069 | 39430;39431;39432 | chr2:178630830;178630829;178630828 | chr2:179495557;179495556;179495555 |
N2A | 12142 | 36649;36650;36651 | chr2:178630830;178630829;178630828 | chr2:179495557;179495556;179495555 |
N2B | 5645 | 17158;17159;17160 | chr2:178630830;178630829;178630828 | chr2:179495557;179495556;179495555 |
Novex-1 | 5770 | 17533;17534;17535 | chr2:178630830;178630829;178630828 | chr2:179495557;179495556;179495555 |
Novex-2 | 5837 | 17734;17735;17736 | chr2:178630830;178630829;178630828 | chr2:179495557;179495556;179495555 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/N | None | None | 0.999 | N | 0.637 | 0.171 | 0.128392430309 | gnomAD-4.0.0 | 6.84456E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99747E-07 | 0 | 0 |
K/Q | None | None | 0.997 | N | 0.639 | 0.284 | 0.223146558224 | gnomAD-4.0.0 | 2.05388E-06 | None | None | None | None | N | None | 0 | 2.23694E-05 | None | 0 | 0 | None | 0 | 0 | 1.80003E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.5804 | likely_pathogenic | 0.7423 | pathogenic | -0.031 | Destabilizing | 0.997 | D | 0.54 | neutral | None | None | None | None | N |
K/C | 0.744 | likely_pathogenic | 0.8423 | pathogenic | -0.236 | Destabilizing | 1.0 | D | 0.715 | prob.delet. | None | None | None | None | N |
K/D | 0.6795 | likely_pathogenic | 0.8141 | pathogenic | 0.288 | Stabilizing | 0.999 | D | 0.733 | deleterious | None | None | None | None | N |
K/E | 0.3907 | ambiguous | 0.5715 | pathogenic | 0.298 | Stabilizing | 0.991 | D | 0.499 | neutral | N | 0.511789073 | None | None | N |
K/F | 0.9095 | likely_pathogenic | 0.9565 | pathogenic | -0.26 | Destabilizing | 1.0 | D | 0.689 | prob.delet. | None | None | None | None | N |
K/G | 0.5125 | ambiguous | 0.6598 | pathogenic | -0.233 | Destabilizing | 0.999 | D | 0.623 | neutral | None | None | None | None | N |
K/H | 0.3948 | ambiguous | 0.5037 | ambiguous | -0.567 | Destabilizing | 1.0 | D | 0.636 | neutral | None | None | None | None | N |
K/I | 0.8036 | likely_pathogenic | 0.9059 | pathogenic | 0.418 | Stabilizing | 1.0 | D | 0.735 | deleterious | None | None | None | None | N |
K/L | 0.6304 | likely_pathogenic | 0.7478 | pathogenic | 0.418 | Stabilizing | 0.999 | D | 0.623 | neutral | None | None | None | None | N |
K/M | 0.4815 | ambiguous | 0.6176 | pathogenic | 0.256 | Stabilizing | 1.0 | D | 0.654 | prob.neutral | N | 0.517682384 | None | None | N |
K/N | 0.4825 | ambiguous | 0.6108 | pathogenic | 0.261 | Stabilizing | 0.999 | D | 0.637 | neutral | N | 0.410884909 | None | None | N |
K/P | 0.9362 | likely_pathogenic | 0.9722 | pathogenic | 0.297 | Stabilizing | 1.0 | D | 0.722 | deleterious | None | None | None | None | N |
K/Q | 0.2091 | likely_benign | 0.2948 | benign | 0.081 | Stabilizing | 0.997 | D | 0.639 | neutral | N | 0.421211686 | None | None | N |
K/R | 0.0851 | likely_benign | 0.0957 | benign | -0.022 | Destabilizing | 0.451 | N | 0.259 | neutral | N | 0.515050768 | None | None | N |
K/S | 0.6203 | likely_pathogenic | 0.7711 | pathogenic | -0.288 | Destabilizing | 0.997 | D | 0.581 | neutral | None | None | None | None | N |
K/T | 0.571 | likely_pathogenic | 0.7632 | pathogenic | -0.125 | Destabilizing | 0.999 | D | 0.683 | prob.neutral | N | 0.51568959 | None | None | N |
K/V | 0.7625 | likely_pathogenic | 0.8795 | pathogenic | 0.297 | Stabilizing | 0.999 | D | 0.717 | prob.delet. | None | None | None | None | N |
K/W | 0.8492 | likely_pathogenic | 0.9221 | pathogenic | -0.248 | Destabilizing | 1.0 | D | 0.7 | prob.delet. | None | None | None | None | N |
K/Y | 0.7405 | likely_pathogenic | 0.8503 | pathogenic | 0.119 | Stabilizing | 1.0 | D | 0.677 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.