Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14730 | 44413;44414;44415 | chr2:178630334;178630333;178630332 | chr2:179495061;179495060;179495059 |
N2AB | 13089 | 39490;39491;39492 | chr2:178630334;178630333;178630332 | chr2:179495061;179495060;179495059 |
N2A | 12162 | 36709;36710;36711 | chr2:178630334;178630333;178630332 | chr2:179495061;179495060;179495059 |
N2B | 5665 | 17218;17219;17220 | chr2:178630334;178630333;178630332 | chr2:179495061;179495060;179495059 |
Novex-1 | 5790 | 17593;17594;17595 | chr2:178630334;178630333;178630332 | chr2:179495061;179495060;179495059 |
Novex-2 | 5857 | 17794;17795;17796 | chr2:178630334;178630333;178630332 | chr2:179495061;179495060;179495059 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/F | None | None | None | N | 0.283 | 0.046 | 0.210429274316 | gnomAD-4.0.0 | 1.59593E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86302E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.092 | likely_benign | 0.0916 | benign | -0.636 | Destabilizing | 0.001 | N | 0.303 | neutral | N | 0.437802437 | None | None | N |
S/C | 0.0507 | likely_benign | 0.0586 | benign | -0.541 | Destabilizing | None | N | 0.378 | neutral | N | 0.437048332 | None | None | N |
S/D | 0.4962 | ambiguous | 0.4213 | ambiguous | -1.593 | Destabilizing | 0.017 | N | 0.429 | neutral | None | None | None | None | N |
S/E | 0.4763 | ambiguous | 0.4546 | ambiguous | -1.37 | Destabilizing | 0.017 | N | 0.433 | neutral | None | None | None | None | N |
S/F | 0.0483 | likely_benign | 0.0568 | benign | -0.341 | Destabilizing | None | N | 0.283 | neutral | N | 0.402710675 | None | None | N |
S/G | 0.1715 | likely_benign | 0.1596 | benign | -1.057 | Destabilizing | 0.008 | N | 0.471 | neutral | None | None | None | None | N |
S/H | 0.1409 | likely_benign | 0.1642 | benign | -1.451 | Destabilizing | 0.131 | N | 0.469 | neutral | None | None | None | None | N |
S/I | 0.0762 | likely_benign | 0.0778 | benign | 0.444 | Stabilizing | None | N | 0.366 | neutral | None | None | None | None | N |
S/K | 0.4987 | ambiguous | 0.5043 | ambiguous | -0.331 | Destabilizing | 0.017 | N | 0.441 | neutral | None | None | None | None | N |
S/L | 0.0938 | likely_benign | 0.0906 | benign | 0.444 | Stabilizing | None | N | 0.435 | neutral | None | None | None | None | N |
S/M | 0.1349 | likely_benign | 0.1442 | benign | 0.188 | Stabilizing | None | N | 0.313 | neutral | None | None | None | None | N |
S/N | 0.162 | likely_benign | 0.1537 | benign | -1.12 | Destabilizing | 0.017 | N | 0.405 | neutral | None | None | None | None | N |
S/P | 0.9661 | likely_pathogenic | 0.9447 | pathogenic | 0.119 | Stabilizing | 0.09 | N | 0.549 | neutral | N | 0.440029136 | None | None | N |
S/Q | 0.3199 | likely_benign | 0.357 | ambiguous | -0.751 | Destabilizing | 0.041 | N | 0.484 | neutral | None | None | None | None | N |
S/R | 0.3253 | likely_benign | 0.3322 | benign | -0.819 | Destabilizing | 0.041 | N | 0.552 | neutral | None | None | None | None | N |
S/T | 0.0727 | likely_benign | 0.073 | benign | -0.697 | Destabilizing | None | N | 0.183 | neutral | N | 0.366462325 | None | None | N |
S/V | 0.0884 | likely_benign | 0.0858 | benign | 0.119 | Stabilizing | None | N | 0.283 | neutral | None | None | None | None | N |
S/W | 0.1423 | likely_benign | 0.1419 | benign | -0.754 | Destabilizing | 0.131 | N | 0.531 | neutral | None | None | None | None | N |
S/Y | 0.0563 | likely_benign | 0.062 | benign | -0.244 | Destabilizing | 0.003 | N | 0.489 | neutral | N | 0.438616853 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.