Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14733 | 44422;44423;44424 | chr2:178630325;178630324;178630323 | chr2:179495052;179495051;179495050 |
N2AB | 13092 | 39499;39500;39501 | chr2:178630325;178630324;178630323 | chr2:179495052;179495051;179495050 |
N2A | 12165 | 36718;36719;36720 | chr2:178630325;178630324;178630323 | chr2:179495052;179495051;179495050 |
N2B | 5668 | 17227;17228;17229 | chr2:178630325;178630324;178630323 | chr2:179495052;179495051;179495050 |
Novex-1 | 5793 | 17602;17603;17604 | chr2:178630325;178630324;178630323 | chr2:179495052;179495051;179495050 |
Novex-2 | 5860 | 17803;17804;17805 | chr2:178630325;178630324;178630323 | chr2:179495052;179495051;179495050 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/S | None | None | 0.999 | D | 0.879 | 0.526 | 0.730100223331 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.9647 | likely_pathogenic | 0.9742 | pathogenic | -3.012 | Highly Destabilizing | 0.998 | D | 0.744 | deleterious | None | None | None | None | N |
L/C | 0.9324 | likely_pathogenic | 0.9463 | pathogenic | -2.472 | Highly Destabilizing | 1.0 | D | 0.828 | deleterious | None | None | None | None | N |
L/D | 0.9984 | likely_pathogenic | 0.9989 | pathogenic | -3.358 | Highly Destabilizing | 1.0 | D | 0.887 | deleterious | None | None | None | None | N |
L/E | 0.9889 | likely_pathogenic | 0.9924 | pathogenic | -3.142 | Highly Destabilizing | 0.999 | D | 0.871 | deleterious | None | None | None | None | N |
L/F | 0.3558 | ambiguous | 0.3971 | ambiguous | -1.89 | Destabilizing | 0.999 | D | 0.83 | deleterious | N | 0.511111677 | None | None | N |
L/G | 0.9926 | likely_pathogenic | 0.9948 | pathogenic | -3.577 | Highly Destabilizing | 0.999 | D | 0.861 | deleterious | None | None | None | None | N |
L/H | 0.9416 | likely_pathogenic | 0.9595 | pathogenic | -2.916 | Highly Destabilizing | 1.0 | D | 0.873 | deleterious | None | None | None | None | N |
L/I | 0.1299 | likely_benign | 0.1427 | benign | -1.37 | Destabilizing | 0.998 | D | 0.543 | neutral | None | None | None | None | N |
L/K | 0.968 | likely_pathogenic | 0.9794 | pathogenic | -2.525 | Highly Destabilizing | 0.999 | D | 0.885 | deleterious | None | None | None | None | N |
L/M | 0.2836 | likely_benign | 0.328 | benign | -1.271 | Destabilizing | 0.999 | D | 0.815 | deleterious | D | 0.542361737 | None | None | N |
L/N | 0.9893 | likely_pathogenic | 0.9934 | pathogenic | -2.835 | Highly Destabilizing | 1.0 | D | 0.893 | deleterious | None | None | None | None | N |
L/P | 0.994 | likely_pathogenic | 0.9955 | pathogenic | -1.899 | Destabilizing | 1.0 | D | 0.894 | deleterious | None | None | None | None | N |
L/Q | 0.9307 | likely_pathogenic | 0.951 | pathogenic | -2.729 | Highly Destabilizing | 1.0 | D | 0.898 | deleterious | None | None | None | None | N |
L/R | 0.9368 | likely_pathogenic | 0.9522 | pathogenic | -2.093 | Highly Destabilizing | 0.999 | D | 0.893 | deleterious | None | None | None | None | N |
L/S | 0.9841 | likely_pathogenic | 0.9886 | pathogenic | -3.568 | Highly Destabilizing | 0.999 | D | 0.879 | deleterious | D | 0.605397585 | None | None | N |
L/T | 0.9599 | likely_pathogenic | 0.9722 | pathogenic | -3.199 | Highly Destabilizing | 0.999 | D | 0.862 | deleterious | None | None | None | None | N |
L/V | 0.2873 | likely_benign | 0.3069 | benign | -1.899 | Destabilizing | 0.997 | D | 0.521 | neutral | N | 0.506346501 | None | None | N |
L/W | 0.7799 | likely_pathogenic | 0.8176 | pathogenic | -2.248 | Highly Destabilizing | 1.0 | D | 0.855 | deleterious | D | 0.606217409 | None | None | N |
L/Y | 0.8703 | likely_pathogenic | 0.9 | pathogenic | -2.051 | Highly Destabilizing | 0.999 | D | 0.863 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.