Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14756 | 44491;44492;44493 | chr2:178630256;178630255;178630254 | chr2:179494983;179494982;179494981 |
N2AB | 13115 | 39568;39569;39570 | chr2:178630256;178630255;178630254 | chr2:179494983;179494982;179494981 |
N2A | 12188 | 36787;36788;36789 | chr2:178630256;178630255;178630254 | chr2:179494983;179494982;179494981 |
N2B | 5691 | 17296;17297;17298 | chr2:178630256;178630255;178630254 | chr2:179494983;179494982;179494981 |
Novex-1 | 5816 | 17671;17672;17673 | chr2:178630256;178630255;178630254 | chr2:179494983;179494982;179494981 |
Novex-2 | 5883 | 17872;17873;17874 | chr2:178630256;178630255;178630254 | chr2:179494983;179494982;179494981 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/N | None | None | 0.828 | N | 0.51 | 0.214 | 0.171388866994 | gnomAD-4.0.0 | 1.59299E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.77948E-05 | None | 0 | 0 | 0 | 0 | 0 |
H/Y | rs766470098 | 0.629 | 0.936 | N | 0.569 | 0.216 | 0.193865811164 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 2.9E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
H/Y | rs766470098 | 0.629 | 0.936 | N | 0.569 | 0.216 | 0.193865811164 | gnomAD-4.0.0 | 1.59299E-06 | None | None | None | None | N | None | 0 | 2.28822E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/A | 0.3962 | ambiguous | 0.5564 | ambiguous | -0.412 | Destabilizing | 0.565 | D | 0.438 | neutral | None | None | None | None | N |
H/C | 0.2574 | likely_benign | 0.3715 | ambiguous | 0.1 | Stabilizing | 0.996 | D | 0.619 | neutral | None | None | None | None | N |
H/D | 0.3487 | ambiguous | 0.5538 | ambiguous | 0.037 | Stabilizing | 0.704 | D | 0.618 | neutral | N | 0.432991937 | None | None | N |
H/E | 0.4303 | ambiguous | 0.619 | pathogenic | 0.094 | Stabilizing | 0.394 | N | 0.35 | neutral | None | None | None | None | N |
H/F | 0.2904 | likely_benign | 0.3789 | ambiguous | 0.43 | Stabilizing | 0.986 | D | 0.671 | prob.neutral | None | None | None | None | N |
H/G | 0.5393 | ambiguous | 0.6894 | pathogenic | -0.73 | Destabilizing | 0.864 | D | 0.583 | neutral | None | None | None | None | N |
H/I | 0.2957 | likely_benign | 0.4491 | ambiguous | 0.429 | Stabilizing | 0.986 | D | 0.685 | prob.delet. | None | None | None | None | N |
H/K | 0.3696 | ambiguous | 0.5594 | ambiguous | -0.348 | Destabilizing | 0.017 | N | 0.233 | neutral | None | None | None | None | N |
H/L | 0.1362 | likely_benign | 0.2012 | benign | 0.429 | Stabilizing | 0.704 | D | 0.563 | neutral | N | 0.42896571 | None | None | N |
H/M | 0.464 | ambiguous | 0.5662 | pathogenic | 0.264 | Stabilizing | 0.986 | D | 0.623 | neutral | None | None | None | None | N |
H/N | 0.1193 | likely_benign | 0.204 | benign | -0.339 | Destabilizing | 0.828 | D | 0.51 | neutral | N | 0.372476485 | None | None | N |
H/P | 0.38 | ambiguous | 0.5261 | ambiguous | 0.173 | Stabilizing | 0.936 | D | 0.672 | prob.neutral | N | 0.433787844 | None | None | N |
H/Q | 0.234 | likely_benign | 0.355 | ambiguous | -0.19 | Destabilizing | 0.013 | N | 0.159 | neutral | N | 0.369747551 | None | None | N |
H/R | 0.1836 | likely_benign | 0.3041 | benign | -0.76 | Destabilizing | 0.329 | N | 0.473 | neutral | N | 0.40172281 | None | None | N |
H/S | 0.2809 | likely_benign | 0.4074 | ambiguous | -0.467 | Destabilizing | 0.565 | D | 0.492 | neutral | None | None | None | None | N |
H/T | 0.33 | likely_benign | 0.4803 | ambiguous | -0.304 | Destabilizing | 0.864 | D | 0.614 | neutral | None | None | None | None | N |
H/V | 0.2592 | likely_benign | 0.3851 | ambiguous | 0.173 | Stabilizing | 0.864 | D | 0.65 | prob.neutral | None | None | None | None | N |
H/W | 0.425 | ambiguous | 0.5026 | ambiguous | 0.626 | Stabilizing | 0.996 | D | 0.608 | neutral | None | None | None | None | N |
H/Y | 0.098 | likely_benign | 0.1432 | benign | 0.834 | Stabilizing | 0.936 | D | 0.569 | neutral | N | 0.432023317 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.