Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 1478 | 4657;4658;4659 | chr2:178777752;178777751;178777750 | chr2:179642479;179642478;179642477 |
N2AB | 1478 | 4657;4658;4659 | chr2:178777752;178777751;178777750 | chr2:179642479;179642478;179642477 |
N2A | 1478 | 4657;4658;4659 | chr2:178777752;178777751;178777750 | chr2:179642479;179642478;179642477 |
N2B | 1432 | 4519;4520;4521 | chr2:178777752;178777751;178777750 | chr2:179642479;179642478;179642477 |
Novex-1 | 1432 | 4519;4520;4521 | chr2:178777752;178777751;178777750 | chr2:179642479;179642478;179642477 |
Novex-2 | 1432 | 4519;4520;4521 | chr2:178777752;178777751;178777750 | chr2:179642479;179642478;179642477 |
Novex-3 | 1478 | 4657;4658;4659 | chr2:178777752;178777751;178777750 | chr2:179642479;179642478;179642477 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/F | rs1175803570 | -1.625 | 1.0 | N | 0.839 | 0.515 | 0.594452868026 | gnomAD-2.1.1 | 3.99E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.82E-06 | 0 |
L/F | rs1175803570 | -1.625 | 1.0 | N | 0.839 | 0.515 | 0.594452868026 | gnomAD-4.0.0 | 1.36821E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.79866E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.7695 | likely_pathogenic | 0.8254 | pathogenic | -2.758 | Highly Destabilizing | 0.999 | D | 0.766 | deleterious | None | None | None | None | I |
L/C | 0.7362 | likely_pathogenic | 0.7789 | pathogenic | -2.327 | Highly Destabilizing | 1.0 | D | 0.85 | deleterious | None | None | None | None | I |
L/D | 0.9984 | likely_pathogenic | 0.9989 | pathogenic | -3.099 | Highly Destabilizing | 1.0 | D | 0.888 | deleterious | None | None | None | None | I |
L/E | 0.9873 | likely_pathogenic | 0.991 | pathogenic | -2.837 | Highly Destabilizing | 1.0 | D | 0.87 | deleterious | None | None | None | None | I |
L/F | 0.6558 | likely_pathogenic | 0.7129 | pathogenic | -1.648 | Destabilizing | 1.0 | D | 0.839 | deleterious | N | 0.508641744 | None | None | I |
L/G | 0.9678 | likely_pathogenic | 0.9768 | pathogenic | -3.355 | Highly Destabilizing | 1.0 | D | 0.866 | deleterious | None | None | None | None | I |
L/H | 0.9717 | likely_pathogenic | 0.978 | pathogenic | -2.793 | Highly Destabilizing | 1.0 | D | 0.869 | deleterious | None | None | None | None | I |
L/I | 0.1411 | likely_benign | 0.1627 | benign | -1.011 | Destabilizing | 0.999 | D | 0.691 | prob.neutral | N | 0.486180307 | None | None | I |
L/K | 0.99 | likely_pathogenic | 0.9915 | pathogenic | -2.175 | Highly Destabilizing | 1.0 | D | 0.877 | deleterious | None | None | None | None | I |
L/M | 0.2117 | likely_benign | 0.2444 | benign | -1.147 | Destabilizing | 1.0 | D | 0.818 | deleterious | None | None | None | None | I |
L/N | 0.9819 | likely_pathogenic | 0.9873 | pathogenic | -2.632 | Highly Destabilizing | 1.0 | D | 0.887 | deleterious | None | None | None | None | I |
L/P | 0.9988 | likely_pathogenic | 0.999 | pathogenic | -1.576 | Destabilizing | 1.0 | D | 0.882 | deleterious | None | None | None | None | I |
L/Q | 0.9431 | likely_pathogenic | 0.9536 | pathogenic | -2.434 | Highly Destabilizing | 1.0 | D | 0.889 | deleterious | None | None | None | None | I |
L/R | 0.9788 | likely_pathogenic | 0.9818 | pathogenic | -1.939 | Destabilizing | 1.0 | D | 0.875 | deleterious | None | None | None | None | I |
L/S | 0.9291 | likely_pathogenic | 0.9507 | pathogenic | -3.384 | Highly Destabilizing | 1.0 | D | 0.873 | deleterious | D | 0.528333096 | None | None | I |
L/T | 0.7423 | likely_pathogenic | 0.8031 | pathogenic | -2.958 | Highly Destabilizing | 1.0 | D | 0.857 | deleterious | None | None | None | None | I |
L/V | 0.1263 | likely_benign | 0.148 | benign | -1.576 | Destabilizing | 0.999 | D | 0.689 | prob.neutral | N | 0.423398995 | None | None | I |
L/W | 0.9691 | likely_pathogenic | 0.9751 | pathogenic | -2.022 | Highly Destabilizing | 1.0 | D | 0.849 | deleterious | None | None | None | None | I |
L/Y | 0.9635 | likely_pathogenic | 0.9708 | pathogenic | -1.763 | Destabilizing | 1.0 | D | 0.838 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.