Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14792 | 44599;44600;44601 | chr2:178629351;178629350;178629349 | chr2:179494078;179494077;179494076 |
N2AB | 13151 | 39676;39677;39678 | chr2:178629351;178629350;178629349 | chr2:179494078;179494077;179494076 |
N2A | 12224 | 36895;36896;36897 | chr2:178629351;178629350;178629349 | chr2:179494078;179494077;179494076 |
N2B | 5727 | 17404;17405;17406 | chr2:178629351;178629350;178629349 | chr2:179494078;179494077;179494076 |
Novex-1 | 5852 | 17779;17780;17781 | chr2:178629351;178629350;178629349 | chr2:179494078;179494077;179494076 |
Novex-2 | 5919 | 17980;17981;17982 | chr2:178629351;178629350;178629349 | chr2:179494078;179494077;179494076 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/F | rs536313527 | None | 0.998 | D | 0.607 | 0.448 | 0.733197302235 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 1.94024E-04 | None | 0 | 0 | 0 | 0 | 0 |
I/F | rs536313527 | None | 0.998 | D | 0.607 | 0.448 | 0.733197302235 | gnomAD-4.0.0 | 1.31377E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 3.88954E-04 | None | 0 | 0 | 0 | 0 | 0 |
I/M | None | None | 0.998 | N | 0.579 | 0.226 | 0.596816321548 | gnomAD-4.0.0 | 6.84613E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99836E-07 | 0 | 0 |
I/N | rs747654057 | -2.055 | 0.999 | D | 0.722 | 0.534 | 0.887531180484 | gnomAD-2.1.1 | 2.82E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 6.22E-05 | 0 |
I/N | rs747654057 | -2.055 | 0.999 | D | 0.722 | 0.534 | 0.887531180484 | gnomAD-3.1.2 | 1.32E-05 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 2.94E-05 | 0 | 0 |
I/N | rs747654057 | -2.055 | 0.999 | D | 0.722 | 0.534 | 0.887531180484 | gnomAD-4.0.0 | 3.53426E-05 | None | None | None | None | N | None | 0 | 3.33578E-05 | None | 0 | 0 | None | 0 | 0 | 4.40942E-05 | 0 | 4.80692E-05 |
I/T | rs747654057 | -2.448 | 0.989 | N | 0.605 | 0.471 | None | gnomAD-2.1.1 | 1.61E-05 | None | None | None | None | N | None | 1.93899E-04 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.89E-06 | 0 |
I/T | rs747654057 | -2.448 | 0.989 | N | 0.605 | 0.471 | None | gnomAD-3.1.2 | 3.29E-05 | None | None | None | None | N | None | 1.20621E-04 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
I/T | rs747654057 | -2.448 | 0.989 | N | 0.605 | 0.471 | None | gnomAD-4.0.0 | 6.8205E-06 | None | None | None | None | N | None | 1.33547E-04 | 0 | None | 0 | 0 | None | 0 | 0 | 8.47965E-07 | 0 | 0 |
I/V | None | None | 0.333 | N | 0.211 | 0.194 | 0.577073266457 | gnomAD-4.0.0 | 4.8013E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.25002E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.8376 | likely_pathogenic | 0.8565 | pathogenic | -1.911 | Destabilizing | 0.992 | D | 0.471 | neutral | None | None | None | None | N |
I/C | 0.9279 | likely_pathogenic | 0.9316 | pathogenic | -0.973 | Destabilizing | 1.0 | D | 0.601 | neutral | None | None | None | None | N |
I/D | 0.95 | likely_pathogenic | 0.9636 | pathogenic | -1.62 | Destabilizing | 1.0 | D | 0.716 | prob.delet. | None | None | None | None | N |
I/E | 0.9309 | likely_pathogenic | 0.9494 | pathogenic | -1.545 | Destabilizing | 1.0 | D | 0.704 | prob.neutral | None | None | None | None | N |
I/F | 0.4245 | ambiguous | 0.4804 | ambiguous | -1.254 | Destabilizing | 0.998 | D | 0.607 | neutral | D | 0.551104527 | None | None | N |
I/G | 0.9611 | likely_pathogenic | 0.9656 | pathogenic | -2.304 | Highly Destabilizing | 1.0 | D | 0.703 | prob.neutral | None | None | None | None | N |
I/H | 0.8941 | likely_pathogenic | 0.9167 | pathogenic | -1.559 | Destabilizing | 1.0 | D | 0.674 | neutral | None | None | None | None | N |
I/K | 0.873 | likely_pathogenic | 0.9025 | pathogenic | -1.318 | Destabilizing | 1.0 | D | 0.7 | prob.neutral | None | None | None | None | N |
I/L | 0.2589 | likely_benign | 0.2878 | benign | -0.859 | Destabilizing | 0.889 | D | 0.429 | neutral | N | 0.502561039 | None | None | N |
I/M | 0.2881 | likely_benign | 0.3241 | benign | -0.617 | Destabilizing | 0.998 | D | 0.579 | neutral | N | 0.510311447 | None | None | N |
I/N | 0.6879 | likely_pathogenic | 0.7319 | pathogenic | -1.237 | Destabilizing | 0.999 | D | 0.722 | prob.delet. | D | 0.595347389 | None | None | N |
I/P | 0.9581 | likely_pathogenic | 0.9648 | pathogenic | -1.182 | Destabilizing | 1.0 | D | 0.719 | prob.delet. | None | None | None | None | N |
I/Q | 0.89 | likely_pathogenic | 0.9097 | pathogenic | -1.329 | Destabilizing | 1.0 | D | 0.715 | prob.delet. | None | None | None | None | N |
I/R | 0.8235 | likely_pathogenic | 0.8625 | pathogenic | -0.803 | Destabilizing | 1.0 | D | 0.724 | prob.delet. | None | None | None | None | N |
I/S | 0.7229 | likely_pathogenic | 0.7537 | pathogenic | -1.841 | Destabilizing | 0.998 | D | 0.637 | neutral | N | 0.507580693 | None | None | N |
I/T | 0.6779 | likely_pathogenic | 0.7095 | pathogenic | -1.641 | Destabilizing | 0.989 | D | 0.605 | neutral | N | 0.495204238 | None | None | N |
I/V | 0.1758 | likely_benign | 0.1744 | benign | -1.182 | Destabilizing | 0.333 | N | 0.211 | neutral | N | 0.416563306 | None | None | N |
I/W | 0.9608 | likely_pathogenic | 0.9668 | pathogenic | -1.436 | Destabilizing | 1.0 | D | 0.651 | neutral | None | None | None | None | N |
I/Y | 0.83 | likely_pathogenic | 0.8626 | pathogenic | -1.179 | Destabilizing | 1.0 | D | 0.634 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.