Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14794 | 44605;44606;44607 | chr2:178629345;178629344;178629343 | chr2:179494072;179494071;179494070 |
N2AB | 13153 | 39682;39683;39684 | chr2:178629345;178629344;178629343 | chr2:179494072;179494071;179494070 |
N2A | 12226 | 36901;36902;36903 | chr2:178629345;178629344;178629343 | chr2:179494072;179494071;179494070 |
N2B | 5729 | 17410;17411;17412 | chr2:178629345;178629344;178629343 | chr2:179494072;179494071;179494070 |
Novex-1 | 5854 | 17785;17786;17787 | chr2:178629345;178629344;178629343 | chr2:179494072;179494071;179494070 |
Novex-2 | 5921 | 17986;17987;17988 | chr2:178629345;178629344;178629343 | chr2:179494072;179494071;179494070 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/G | rs779834438 | -2.645 | 1.0 | N | 0.856 | 0.676 | 0.815322740875 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 0 | 0 |
V/G | rs779834438 | -2.645 | 1.0 | N | 0.856 | 0.676 | 0.815322740875 | gnomAD-4.0.0 | 2.73842E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 4.63876E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.3313 | likely_benign | 0.3771 | ambiguous | -1.676 | Destabilizing | 0.999 | D | 0.642 | neutral | D | 0.582767262 | None | None | N |
V/C | 0.88 | likely_pathogenic | 0.9075 | pathogenic | -0.997 | Destabilizing | 1.0 | D | 0.805 | deleterious | None | None | None | None | N |
V/D | 0.9556 | likely_pathogenic | 0.9789 | pathogenic | -1.904 | Destabilizing | 1.0 | D | 0.855 | deleterious | None | None | None | None | N |
V/E | 0.8994 | likely_pathogenic | 0.9394 | pathogenic | -1.815 | Destabilizing | 1.0 | D | 0.862 | deleterious | D | 0.730489284 | None | None | N |
V/F | 0.6447 | likely_pathogenic | 0.7231 | pathogenic | -1.178 | Destabilizing | 1.0 | D | 0.797 | deleterious | None | None | None | None | N |
V/G | 0.6307 | likely_pathogenic | 0.698 | pathogenic | -2.069 | Highly Destabilizing | 1.0 | D | 0.856 | deleterious | N | 0.511351758 | None | None | N |
V/H | 0.9692 | likely_pathogenic | 0.9828 | pathogenic | -1.672 | Destabilizing | 1.0 | D | 0.868 | deleterious | None | None | None | None | N |
V/I | 0.1446 | likely_benign | 0.1604 | benign | -0.648 | Destabilizing | 0.998 | D | 0.642 | neutral | None | None | None | None | N |
V/K | 0.9132 | likely_pathogenic | 0.9497 | pathogenic | -1.428 | Destabilizing | 1.0 | D | 0.863 | deleterious | None | None | None | None | N |
V/L | 0.572 | likely_pathogenic | 0.6231 | pathogenic | -0.648 | Destabilizing | 0.997 | D | 0.671 | neutral | D | 0.580311369 | None | None | N |
V/M | 0.429 | ambiguous | 0.5044 | ambiguous | -0.496 | Destabilizing | 1.0 | D | 0.751 | deleterious | D | 0.693095501 | None | None | N |
V/N | 0.9061 | likely_pathogenic | 0.9504 | pathogenic | -1.367 | Destabilizing | 1.0 | D | 0.871 | deleterious | None | None | None | None | N |
V/P | 0.8462 | likely_pathogenic | 0.8901 | pathogenic | -0.959 | Destabilizing | 1.0 | D | 0.867 | deleterious | None | None | None | None | N |
V/Q | 0.8894 | likely_pathogenic | 0.929 | pathogenic | -1.425 | Destabilizing | 1.0 | D | 0.877 | deleterious | None | None | None | None | N |
V/R | 0.8763 | likely_pathogenic | 0.9218 | pathogenic | -1.024 | Destabilizing | 1.0 | D | 0.869 | deleterious | None | None | None | None | N |
V/S | 0.6365 | likely_pathogenic | 0.7077 | pathogenic | -1.862 | Destabilizing | 1.0 | D | 0.862 | deleterious | None | None | None | None | N |
V/T | 0.3957 | ambiguous | 0.4443 | ambiguous | -1.652 | Destabilizing | 0.999 | D | 0.704 | prob.neutral | None | None | None | None | N |
V/W | 0.9854 | likely_pathogenic | 0.9903 | pathogenic | -1.506 | Destabilizing | 1.0 | D | 0.865 | deleterious | None | None | None | None | N |
V/Y | 0.9523 | likely_pathogenic | 0.9674 | pathogenic | -1.157 | Destabilizing | 1.0 | D | 0.799 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.