Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14805 | 44638;44639;44640 | chr2:178629312;178629311;178629310 | chr2:179494039;179494038;179494037 |
N2AB | 13164 | 39715;39716;39717 | chr2:178629312;178629311;178629310 | chr2:179494039;179494038;179494037 |
N2A | 12237 | 36934;36935;36936 | chr2:178629312;178629311;178629310 | chr2:179494039;179494038;179494037 |
N2B | 5740 | 17443;17444;17445 | chr2:178629312;178629311;178629310 | chr2:179494039;179494038;179494037 |
Novex-1 | 5865 | 17818;17819;17820 | chr2:178629312;178629311;178629310 | chr2:179494039;179494038;179494037 |
Novex-2 | 5932 | 18019;18020;18021 | chr2:178629312;178629311;178629310 | chr2:179494039;179494038;179494037 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/S | None | None | 1.0 | N | 0.717 | 0.325 | 0.362758974969 | gnomAD-4.0.0 | 6.8475E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99965E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.0692 | likely_benign | 0.0754 | benign | -0.478 | Destabilizing | 1.0 | D | 0.664 | neutral | N | 0.500975008 | None | None | N |
P/C | 0.5493 | ambiguous | 0.5846 | pathogenic | -0.683 | Destabilizing | 1.0 | D | 0.659 | neutral | None | None | None | None | N |
P/D | 0.3144 | likely_benign | 0.3838 | ambiguous | -0.452 | Destabilizing | 1.0 | D | 0.692 | prob.neutral | None | None | None | None | N |
P/E | 0.2377 | likely_benign | 0.2868 | benign | -0.565 | Destabilizing | 1.0 | D | 0.703 | prob.neutral | None | None | None | None | N |
P/F | 0.4141 | ambiguous | 0.4712 | ambiguous | -0.725 | Destabilizing | 1.0 | D | 0.655 | neutral | None | None | None | None | N |
P/G | 0.2541 | likely_benign | 0.2927 | benign | -0.599 | Destabilizing | 1.0 | D | 0.731 | prob.delet. | None | None | None | None | N |
P/H | 0.1787 | likely_benign | 0.2102 | benign | -0.193 | Destabilizing | 1.0 | D | 0.629 | neutral | D | 0.578021121 | None | None | N |
P/I | 0.2551 | likely_benign | 0.2929 | benign | -0.308 | Destabilizing | 1.0 | D | 0.714 | prob.delet. | None | None | None | None | N |
P/K | 0.2424 | likely_benign | 0.2945 | benign | -0.536 | Destabilizing | 1.0 | D | 0.693 | prob.neutral | None | None | None | None | N |
P/L | 0.108 | likely_benign | 0.1228 | benign | -0.308 | Destabilizing | 1.0 | D | 0.744 | deleterious | D | 0.536256031 | None | None | N |
P/M | 0.2755 | likely_benign | 0.3023 | benign | -0.431 | Destabilizing | 1.0 | D | 0.631 | neutral | None | None | None | None | N |
P/N | 0.2387 | likely_benign | 0.2871 | benign | -0.297 | Destabilizing | 1.0 | D | 0.705 | prob.neutral | None | None | None | None | N |
P/Q | 0.1461 | likely_benign | 0.1739 | benign | -0.534 | Destabilizing | 1.0 | D | 0.691 | prob.neutral | None | None | None | None | N |
P/R | 0.1619 | likely_benign | 0.1937 | benign | -0.015 | Destabilizing | 1.0 | D | 0.697 | prob.neutral | N | 0.500752876 | None | None | N |
P/S | 0.1114 | likely_benign | 0.1306 | benign | -0.611 | Destabilizing | 1.0 | D | 0.717 | prob.delet. | N | 0.49871076 | None | None | N |
P/T | 0.0916 | likely_benign | 0.1135 | benign | -0.626 | Destabilizing | 1.0 | D | 0.705 | prob.neutral | N | 0.507709958 | None | None | N |
P/V | 0.1737 | likely_benign | 0.1921 | benign | -0.331 | Destabilizing | 1.0 | D | 0.715 | prob.delet. | None | None | None | None | N |
P/W | 0.6027 | likely_pathogenic | 0.6737 | pathogenic | -0.814 | Destabilizing | 1.0 | D | 0.662 | neutral | None | None | None | None | N |
P/Y | 0.3697 | ambiguous | 0.421 | ambiguous | -0.522 | Destabilizing | 1.0 | D | 0.675 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.