Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14806 | 44641;44642;44643 | chr2:178629309;178629308;178629307 | chr2:179494036;179494035;179494034 |
N2AB | 13165 | 39718;39719;39720 | chr2:178629309;178629308;178629307 | chr2:179494036;179494035;179494034 |
N2A | 12238 | 36937;36938;36939 | chr2:178629309;178629308;178629307 | chr2:179494036;179494035;179494034 |
N2B | 5741 | 17446;17447;17448 | chr2:178629309;178629308;178629307 | chr2:179494036;179494035;179494034 |
Novex-1 | 5866 | 17821;17822;17823 | chr2:178629309;178629308;178629307 | chr2:179494036;179494035;179494034 |
Novex-2 | 5933 | 18022;18023;18024 | chr2:178629309;178629308;178629307 | chr2:179494036;179494035;179494034 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/T | rs778340859 | -0.225 | 0.124 | N | 0.459 | 0.092 | 0.0986583533028 | gnomAD-2.1.1 | 8.08E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 1.13289E-04 | None | 0 | None | 0 | 0 | 0 |
S/T | rs778340859 | -0.225 | 0.124 | N | 0.459 | 0.092 | 0.0986583533028 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 1.94401E-04 | None | 0 | 0 | 0 | 0 | 0 |
S/T | rs778340859 | -0.225 | 0.124 | N | 0.459 | 0.092 | 0.0986583533028 | gnomAD-4.0.0 | 2.56689E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 4.88257E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.156 | likely_benign | 0.1594 | benign | -0.189 | Destabilizing | 0.072 | N | 0.456 | neutral | None | None | None | None | N |
S/C | 0.1577 | likely_benign | 0.1591 | benign | -0.324 | Destabilizing | 0.958 | D | 0.447 | neutral | N | 0.496220995 | None | None | N |
S/D | 0.3443 | ambiguous | 0.3803 | ambiguous | 0.123 | Stabilizing | 0.157 | N | 0.392 | neutral | None | None | None | None | N |
S/E | 0.625 | likely_pathogenic | 0.712 | pathogenic | 0.034 | Stabilizing | 0.157 | N | 0.397 | neutral | None | None | None | None | N |
S/F | 0.4816 | ambiguous | 0.5543 | ambiguous | -0.787 | Destabilizing | 0.89 | D | 0.511 | neutral | None | None | None | None | N |
S/G | 0.0745 | likely_benign | 0.0793 | benign | -0.298 | Destabilizing | None | N | 0.198 | neutral | N | 0.451618433 | None | None | N |
S/H | 0.503 | ambiguous | 0.5328 | ambiguous | -0.736 | Destabilizing | 0.832 | D | 0.397 | neutral | None | None | None | None | N |
S/I | 0.3952 | ambiguous | 0.4357 | ambiguous | -0.037 | Destabilizing | 0.667 | D | 0.494 | neutral | D | 0.600305519 | None | None | N |
S/K | 0.7406 | likely_pathogenic | 0.8051 | pathogenic | -0.504 | Destabilizing | 0.157 | N | 0.405 | neutral | None | None | None | None | N |
S/L | 0.2018 | likely_benign | 0.2129 | benign | -0.037 | Destabilizing | 0.567 | D | 0.447 | neutral | None | None | None | None | N |
S/M | 0.3676 | ambiguous | 0.3794 | ambiguous | -0.013 | Destabilizing | 0.968 | D | 0.425 | neutral | None | None | None | None | N |
S/N | 0.1662 | likely_benign | 0.1553 | benign | -0.265 | Destabilizing | 0.001 | N | 0.285 | neutral | N | 0.455931914 | None | None | N |
S/P | 0.7878 | likely_pathogenic | 0.7857 | pathogenic | -0.058 | Destabilizing | 0.726 | D | 0.365 | neutral | None | None | None | None | N |
S/Q | 0.6777 | likely_pathogenic | 0.7239 | pathogenic | -0.458 | Destabilizing | 0.567 | D | 0.376 | neutral | None | None | None | None | N |
S/R | 0.6755 | likely_pathogenic | 0.7508 | pathogenic | -0.294 | Destabilizing | 0.715 | D | 0.375 | neutral | D | 0.598276693 | None | None | N |
S/T | 0.0972 | likely_benign | 0.0922 | benign | -0.33 | Destabilizing | 0.124 | N | 0.459 | neutral | N | 0.446436766 | None | None | N |
S/V | 0.3736 | ambiguous | 0.3901 | ambiguous | -0.058 | Destabilizing | 0.726 | D | 0.449 | neutral | None | None | None | None | N |
S/W | 0.5883 | likely_pathogenic | 0.6657 | pathogenic | -0.865 | Destabilizing | 0.968 | D | 0.649 | neutral | None | None | None | None | N |
S/Y | 0.423 | ambiguous | 0.4971 | ambiguous | -0.558 | Destabilizing | 0.89 | D | 0.512 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.