Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14822 | 44689;44690;44691 | chr2:178625357;178625356;178625355 | chr2:179490084;179490083;179490082 |
N2AB | 13181 | 39766;39767;39768 | chr2:178625357;178625356;178625355 | chr2:179490084;179490083;179490082 |
N2A | 12254 | 36985;36986;36987 | chr2:178625357;178625356;178625355 | chr2:179490084;179490083;179490082 |
N2B | 5757 | 17494;17495;17496 | chr2:178625357;178625356;178625355 | chr2:179490084;179490083;179490082 |
Novex-1 | 5882 | 17869;17870;17871 | chr2:178625357;178625356;178625355 | chr2:179490084;179490083;179490082 |
Novex-2 | 5949 | 18070;18071;18072 | chr2:178625357;178625356;178625355 | chr2:179490084;179490083;179490082 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/R | rs1235710023 | -1.253 | 0.999 | D | 0.82 | 0.692 | 0.85728530589 | gnomAD-2.1.1 | 4.26E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 9.23E-06 | 0 |
L/R | rs1235710023 | -1.253 | 0.999 | D | 0.82 | 0.692 | 0.85728530589 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
L/R | rs1235710023 | -1.253 | 0.999 | D | 0.82 | 0.692 | 0.85728530589 | gnomAD-4.0.0 | 3.92008E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 7.28116E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.8858 | likely_pathogenic | 0.8969 | pathogenic | -2.962 | Highly Destabilizing | 0.992 | D | 0.671 | neutral | None | None | None | None | N |
L/C | 0.8398 | likely_pathogenic | 0.8539 | pathogenic | -2.628 | Highly Destabilizing | 1.0 | D | 0.734 | prob.delet. | None | None | None | None | N |
L/D | 0.995 | likely_pathogenic | 0.9953 | pathogenic | -3.261 | Highly Destabilizing | 1.0 | D | 0.839 | deleterious | None | None | None | None | N |
L/E | 0.9564 | likely_pathogenic | 0.961 | pathogenic | -2.97 | Highly Destabilizing | 1.0 | D | 0.833 | deleterious | None | None | None | None | N |
L/F | 0.2633 | likely_benign | 0.2804 | benign | -1.824 | Destabilizing | 0.999 | D | 0.719 | prob.delet. | None | None | None | None | N |
L/G | 0.9788 | likely_pathogenic | 0.978 | pathogenic | -3.586 | Highly Destabilizing | 1.0 | D | 0.83 | deleterious | None | None | None | None | N |
L/H | 0.8447 | likely_pathogenic | 0.8603 | pathogenic | -3.047 | Highly Destabilizing | 1.0 | D | 0.821 | deleterious | None | None | None | None | N |
L/I | 0.0887 | likely_benign | 0.0927 | benign | -1.118 | Destabilizing | 0.611 | D | 0.356 | neutral | None | None | None | None | N |
L/K | 0.8828 | likely_pathogenic | 0.8896 | pathogenic | -2.382 | Highly Destabilizing | 1.0 | D | 0.812 | deleterious | None | None | None | None | N |
L/M | 0.1846 | likely_benign | 0.1969 | benign | -1.314 | Destabilizing | 0.998 | D | 0.677 | prob.neutral | D | 0.558424357 | None | None | N |
L/N | 0.9719 | likely_pathogenic | 0.9737 | pathogenic | -2.928 | Highly Destabilizing | 1.0 | D | 0.844 | deleterious | None | None | None | None | N |
L/P | 0.9915 | likely_pathogenic | 0.9901 | pathogenic | -1.718 | Destabilizing | 0.999 | D | 0.84 | deleterious | D | 0.675597966 | None | None | N |
L/Q | 0.8121 | likely_pathogenic | 0.8254 | pathogenic | -2.668 | Highly Destabilizing | 0.999 | D | 0.825 | deleterious | D | 0.675597966 | None | None | N |
L/R | 0.8163 | likely_pathogenic | 0.8237 | pathogenic | -2.209 | Highly Destabilizing | 0.999 | D | 0.82 | deleterious | D | 0.675597966 | None | None | N |
L/S | 0.9487 | likely_pathogenic | 0.9516 | pathogenic | -3.702 | Highly Destabilizing | 0.999 | D | 0.815 | deleterious | None | None | None | None | N |
L/T | 0.8778 | likely_pathogenic | 0.8896 | pathogenic | -3.235 | Highly Destabilizing | 0.998 | D | 0.765 | deleterious | None | None | None | None | N |
L/V | 0.1322 | likely_benign | 0.1461 | benign | -1.718 | Destabilizing | 0.543 | D | 0.34 | neutral | N | 0.509677941 | None | None | N |
L/W | 0.6173 | likely_pathogenic | 0.6035 | pathogenic | -2.164 | Highly Destabilizing | 1.0 | D | 0.795 | deleterious | None | None | None | None | N |
L/Y | 0.7191 | likely_pathogenic | 0.726 | pathogenic | -1.943 | Destabilizing | 1.0 | D | 0.745 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.