Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14836 | 44731;44732;44733 | chr2:178625315;178625314;178625313 | chr2:179490042;179490041;179490040 |
N2AB | 13195 | 39808;39809;39810 | chr2:178625315;178625314;178625313 | chr2:179490042;179490041;179490040 |
N2A | 12268 | 37027;37028;37029 | chr2:178625315;178625314;178625313 | chr2:179490042;179490041;179490040 |
N2B | 5771 | 17536;17537;17538 | chr2:178625315;178625314;178625313 | chr2:179490042;179490041;179490040 |
Novex-1 | 5896 | 17911;17912;17913 | chr2:178625315;178625314;178625313 | chr2:179490042;179490041;179490040 |
Novex-2 | 5963 | 18112;18113;18114 | chr2:178625315;178625314;178625313 | chr2:179490042;179490041;179490040 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | rs761382291 | -1.377 | 0.027 | N | 0.53 | 0.1 | 0.19670166235 | gnomAD-2.1.1 | 4.1E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.97E-06 | 0 |
T/A | rs761382291 | -1.377 | 0.027 | N | 0.53 | 0.1 | 0.19670166235 | gnomAD-4.0.0 | 6.00167E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 6.56258E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0984 | likely_benign | 0.1034 | benign | -1.196 | Destabilizing | 0.027 | N | 0.53 | neutral | N | 0.505198093 | None | None | N |
T/C | 0.4103 | ambiguous | 0.4248 | ambiguous | -0.829 | Destabilizing | 0.824 | D | 0.625 | neutral | None | None | None | None | N |
T/D | 0.4892 | ambiguous | 0.5341 | ambiguous | -1.357 | Destabilizing | 0.38 | N | 0.623 | neutral | None | None | None | None | N |
T/E | 0.2806 | likely_benign | 0.2956 | benign | -1.157 | Destabilizing | 0.081 | N | 0.601 | neutral | None | None | None | None | N |
T/F | 0.2062 | likely_benign | 0.214 | benign | -0.76 | Destabilizing | 0.38 | N | 0.745 | deleterious | None | None | None | None | N |
T/G | 0.3235 | likely_benign | 0.3283 | benign | -1.608 | Destabilizing | 0.149 | N | 0.673 | neutral | None | None | None | None | N |
T/H | 0.2069 | likely_benign | 0.2285 | benign | -1.649 | Destabilizing | 0.824 | D | 0.717 | prob.delet. | None | None | None | None | N |
T/I | 0.1146 | likely_benign | 0.1206 | benign | -0.113 | Destabilizing | 0.022 | N | 0.604 | neutral | N | 0.511456543 | None | None | N |
T/K | 0.1406 | likely_benign | 0.1437 | benign | -0.521 | Destabilizing | 0.062 | N | 0.603 | neutral | N | 0.504046797 | None | None | N |
T/L | 0.085 | likely_benign | 0.0895 | benign | -0.113 | Destabilizing | 0.081 | N | 0.602 | neutral | None | None | None | None | N |
T/M | 0.0795 | likely_benign | 0.0808 | benign | -0.227 | Destabilizing | 0.38 | N | 0.641 | neutral | None | None | None | None | N |
T/N | 0.1689 | likely_benign | 0.1931 | benign | -1.131 | Destabilizing | 0.38 | N | 0.589 | neutral | None | None | None | None | N |
T/P | 0.5797 | likely_pathogenic | 0.6721 | pathogenic | -0.444 | Destabilizing | 0.484 | N | 0.654 | neutral | D | 0.634033351 | None | None | N |
T/Q | 0.1655 | likely_benign | 0.1707 | benign | -0.917 | Destabilizing | 0.235 | N | 0.653 | neutral | None | None | None | None | N |
T/R | 0.0931 | likely_benign | 0.0964 | benign | -0.724 | Destabilizing | 0.001 | N | 0.403 | neutral | N | 0.510170285 | None | None | N |
T/S | 0.152 | likely_benign | 0.1586 | benign | -1.38 | Destabilizing | 0.005 | N | 0.361 | neutral | N | 0.508867805 | None | None | N |
T/V | 0.104 | likely_benign | 0.1023 | benign | -0.444 | Destabilizing | 0.001 | N | 0.271 | neutral | None | None | None | None | N |
T/W | 0.4841 | ambiguous | 0.4819 | ambiguous | -0.894 | Destabilizing | 0.935 | D | 0.751 | deleterious | None | None | None | None | N |
T/Y | 0.276 | likely_benign | 0.2869 | benign | -0.524 | Destabilizing | 0.555 | D | 0.741 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.