Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14855 | 44788;44789;44790 | chr2:178624717;178624716;178624715 | chr2:179489444;179489443;179489442 |
N2AB | 13214 | 39865;39866;39867 | chr2:178624717;178624716;178624715 | chr2:179489444;179489443;179489442 |
N2A | 12287 | 37084;37085;37086 | chr2:178624717;178624716;178624715 | chr2:179489444;179489443;179489442 |
N2B | 5790 | 17593;17594;17595 | chr2:178624717;178624716;178624715 | chr2:179489444;179489443;179489442 |
Novex-1 | 5915 | 17968;17969;17970 | chr2:178624717;178624716;178624715 | chr2:179489444;179489443;179489442 |
Novex-2 | 5982 | 18169;18170;18171 | chr2:178624717;178624716;178624715 | chr2:179489444;179489443;179489442 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/L | rs1424075362 | -2.721 | 0.369 | D | 0.605 | 0.613 | 0.382592752248 | gnomAD-2.1.1 | 4.04E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.95E-06 | 0 |
F/L | rs1424075362 | -2.721 | 0.369 | D | 0.605 | 0.613 | 0.382592752248 | gnomAD-4.0.0 | 1.59464E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86449E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/A | 0.997 | likely_pathogenic | 0.9964 | pathogenic | -2.785 | Highly Destabilizing | 0.916 | D | 0.788 | deleterious | None | None | None | None | N |
F/C | 0.9899 | likely_pathogenic | 0.99 | pathogenic | -1.535 | Destabilizing | 0.999 | D | 0.843 | deleterious | D | 0.766846404 | None | None | N |
F/D | 0.9984 | likely_pathogenic | 0.998 | pathogenic | -2.528 | Highly Destabilizing | 0.996 | D | 0.865 | deleterious | None | None | None | None | N |
F/E | 0.9986 | likely_pathogenic | 0.9984 | pathogenic | -2.426 | Highly Destabilizing | 0.996 | D | 0.868 | deleterious | None | None | None | None | N |
F/G | 0.9981 | likely_pathogenic | 0.998 | pathogenic | -3.143 | Highly Destabilizing | 0.987 | D | 0.859 | deleterious | None | None | None | None | N |
F/H | 0.9958 | likely_pathogenic | 0.9955 | pathogenic | -1.46 | Destabilizing | 0.999 | D | 0.781 | deleterious | None | None | None | None | N |
F/I | 0.8783 | likely_pathogenic | 0.8526 | pathogenic | -1.658 | Destabilizing | 0.056 | N | 0.415 | neutral | N | 0.510147617 | None | None | N |
F/K | 0.9989 | likely_pathogenic | 0.9987 | pathogenic | -1.499 | Destabilizing | 0.987 | D | 0.866 | deleterious | None | None | None | None | N |
F/L | 0.9968 | likely_pathogenic | 0.9966 | pathogenic | -1.658 | Destabilizing | 0.369 | N | 0.605 | neutral | D | 0.634312494 | None | None | N |
F/M | 0.9683 | likely_pathogenic | 0.9642 | pathogenic | -1.339 | Destabilizing | 0.975 | D | 0.746 | deleterious | None | None | None | None | N |
F/N | 0.9955 | likely_pathogenic | 0.9947 | pathogenic | -1.602 | Destabilizing | 0.996 | D | 0.869 | deleterious | None | None | None | None | N |
F/P | 0.9997 | likely_pathogenic | 0.9995 | pathogenic | -2.036 | Highly Destabilizing | 0.996 | D | 0.871 | deleterious | None | None | None | None | N |
F/Q | 0.9987 | likely_pathogenic | 0.9986 | pathogenic | -1.77 | Destabilizing | 0.999 | D | 0.87 | deleterious | None | None | None | None | N |
F/R | 0.9978 | likely_pathogenic | 0.9974 | pathogenic | -0.758 | Destabilizing | 0.996 | D | 0.875 | deleterious | None | None | None | None | N |
F/S | 0.9978 | likely_pathogenic | 0.9976 | pathogenic | -2.314 | Highly Destabilizing | 0.983 | D | 0.843 | deleterious | D | 0.801347206 | None | None | N |
F/T | 0.9971 | likely_pathogenic | 0.9969 | pathogenic | -2.118 | Highly Destabilizing | 0.975 | D | 0.838 | deleterious | None | None | None | None | N |
F/V | 0.9248 | likely_pathogenic | 0.9148 | pathogenic | -2.036 | Highly Destabilizing | 0.587 | D | 0.681 | prob.neutral | D | 0.629873297 | None | None | N |
F/W | 0.9665 | likely_pathogenic | 0.9613 | pathogenic | -0.644 | Destabilizing | 0.999 | D | 0.727 | prob.delet. | None | None | None | None | N |
F/Y | 0.8042 | likely_pathogenic | 0.7843 | pathogenic | -0.918 | Destabilizing | 0.944 | D | 0.59 | neutral | D | 0.766497535 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.