Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 1486 | 4681;4682;4683 | chr2:178777728;178777727;178777726 | chr2:179642455;179642454;179642453 |
N2AB | 1486 | 4681;4682;4683 | chr2:178777728;178777727;178777726 | chr2:179642455;179642454;179642453 |
N2A | 1486 | 4681;4682;4683 | chr2:178777728;178777727;178777726 | chr2:179642455;179642454;179642453 |
N2B | 1440 | 4543;4544;4545 | chr2:178777728;178777727;178777726 | chr2:179642455;179642454;179642453 |
Novex-1 | 1440 | 4543;4544;4545 | chr2:178777728;178777727;178777726 | chr2:179642455;179642454;179642453 |
Novex-2 | 1440 | 4543;4544;4545 | chr2:178777728;178777727;178777726 | chr2:179642455;179642454;179642453 |
Novex-3 | 1486 | 4681;4682;4683 | chr2:178777728;178777727;178777726 | chr2:179642455;179642454;179642453 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/L | None | None | 1.0 | D | 0.831 | 0.716 | 0.835052448565 | gnomAD-4.0.0 | 1.59079E-06 | None | None | None | None | I | None | 0 | 2.28676E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.7771 | likely_pathogenic | 0.8459 | pathogenic | -1.577 | Destabilizing | 1.0 | D | 0.783 | deleterious | D | 0.612406068 | None | None | I |
P/C | 0.993 | likely_pathogenic | 0.9964 | pathogenic | -1.122 | Destabilizing | 1.0 | D | 0.761 | deleterious | None | None | None | None | I |
P/D | 0.9995 | likely_pathogenic | 0.9996 | pathogenic | -2.333 | Highly Destabilizing | 1.0 | D | 0.841 | deleterious | None | None | None | None | I |
P/E | 0.998 | likely_pathogenic | 0.9986 | pathogenic | -2.345 | Highly Destabilizing | 1.0 | D | 0.839 | deleterious | None | None | None | None | I |
P/F | 0.9995 | likely_pathogenic | 0.9997 | pathogenic | -1.372 | Destabilizing | 1.0 | D | 0.817 | deleterious | None | None | None | None | I |
P/G | 0.986 | likely_pathogenic | 0.9902 | pathogenic | -1.87 | Destabilizing | 1.0 | D | 0.81 | deleterious | None | None | None | None | I |
P/H | 0.9988 | likely_pathogenic | 0.9992 | pathogenic | -1.511 | Destabilizing | 1.0 | D | 0.784 | deleterious | None | None | None | None | I |
P/I | 0.9913 | likely_pathogenic | 0.993 | pathogenic | -0.861 | Destabilizing | 1.0 | D | 0.834 | deleterious | None | None | None | None | I |
P/K | 0.9993 | likely_pathogenic | 0.9995 | pathogenic | -1.305 | Destabilizing | 1.0 | D | 0.838 | deleterious | None | None | None | None | I |
P/L | 0.9727 | likely_pathogenic | 0.9779 | pathogenic | -0.861 | Destabilizing | 1.0 | D | 0.831 | deleterious | D | 0.680124808 | None | None | I |
P/M | 0.9957 | likely_pathogenic | 0.9965 | pathogenic | -0.626 | Destabilizing | 1.0 | D | 0.778 | deleterious | None | None | None | None | I |
P/N | 0.9992 | likely_pathogenic | 0.9994 | pathogenic | -1.191 | Destabilizing | 1.0 | D | 0.833 | deleterious | None | None | None | None | I |
P/Q | 0.9974 | likely_pathogenic | 0.9981 | pathogenic | -1.434 | Destabilizing | 1.0 | D | 0.841 | deleterious | D | 0.81682983 | None | None | I |
P/R | 0.9977 | likely_pathogenic | 0.9983 | pathogenic | -0.771 | Destabilizing | 1.0 | D | 0.835 | deleterious | D | 0.81682983 | None | None | I |
P/S | 0.9866 | likely_pathogenic | 0.9906 | pathogenic | -1.554 | Destabilizing | 1.0 | D | 0.838 | deleterious | D | 0.745755943 | None | None | I |
P/T | 0.9777 | likely_pathogenic | 0.9834 | pathogenic | -1.476 | Destabilizing | 1.0 | D | 0.84 | deleterious | D | 0.72414571 | None | None | I |
P/V | 0.9612 | likely_pathogenic | 0.9723 | pathogenic | -1.068 | Destabilizing | 1.0 | D | 0.829 | deleterious | None | None | None | None | I |
P/W | 0.9999 | likely_pathogenic | 0.9999 | pathogenic | -1.62 | Destabilizing | 1.0 | D | 0.76 | deleterious | None | None | None | None | I |
P/Y | 0.9997 | likely_pathogenic | 0.9998 | pathogenic | -1.319 | Destabilizing | 1.0 | D | 0.827 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.