Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 1487 | 4684;4685;4686 | chr2:178777725;178777724;178777723 | chr2:179642452;179642451;179642450 |
N2AB | 1487 | 4684;4685;4686 | chr2:178777725;178777724;178777723 | chr2:179642452;179642451;179642450 |
N2A | 1487 | 4684;4685;4686 | chr2:178777725;178777724;178777723 | chr2:179642452;179642451;179642450 |
N2B | 1441 | 4546;4547;4548 | chr2:178777725;178777724;178777723 | chr2:179642452;179642451;179642450 |
Novex-1 | 1441 | 4546;4547;4548 | chr2:178777725;178777724;178777723 | chr2:179642452;179642451;179642450 |
Novex-2 | 1441 | 4546;4547;4548 | chr2:178777725;178777724;178777723 | chr2:179642452;179642451;179642450 |
Novex-3 | 1487 | 4684;4685;4686 | chr2:178777725;178777724;178777723 | chr2:179642452;179642451;179642450 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/D | None | None | None | N | 0.186 | 0.096 | 0.0954503805726 | gnomAD-4.0.0 | 6.84115E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.15939E-05 | 0 |
E/G | rs1561308394 | None | 0.324 | D | 0.543 | 0.495 | 0.518858945281 | gnomAD-2.1.1 | 3.99E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 5.45E-05 | None | 0 | None | 0 | 0 | 0 |
E/G | rs1561308394 | None | 0.324 | D | 0.543 | 0.495 | 0.518858945281 | gnomAD-4.0.0 | 1.59073E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 2.77331E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.4863 | ambiguous | 0.5009 | ambiguous | -0.679 | Destabilizing | 0.09 | N | 0.474 | neutral | N | 0.513334978 | None | None | I |
E/C | 0.9889 | likely_pathogenic | 0.9898 | pathogenic | -0.382 | Destabilizing | 0.944 | D | 0.586 | neutral | None | None | None | None | I |
E/D | 0.2266 | likely_benign | 0.2388 | benign | -0.641 | Destabilizing | None | N | 0.186 | neutral | N | 0.450978089 | None | None | I |
E/F | 0.9787 | likely_pathogenic | 0.9812 | pathogenic | -0.218 | Destabilizing | 0.69 | D | 0.586 | neutral | None | None | None | None | I |
E/G | 0.6071 | likely_pathogenic | 0.6109 | pathogenic | -0.957 | Destabilizing | 0.324 | N | 0.543 | neutral | D | 0.611257358 | None | None | I |
E/H | 0.8675 | likely_pathogenic | 0.8744 | pathogenic | -0.126 | Destabilizing | 0.932 | D | 0.456 | neutral | None | None | None | None | I |
E/I | 0.8284 | likely_pathogenic | 0.8392 | pathogenic | 0.053 | Stabilizing | 0.098 | N | 0.574 | neutral | None | None | None | None | I |
E/K | 0.483 | ambiguous | 0.4961 | ambiguous | -0.161 | Destabilizing | 0.324 | N | 0.47 | neutral | N | 0.486443687 | None | None | I |
E/L | 0.8491 | likely_pathogenic | 0.8552 | pathogenic | 0.053 | Stabilizing | 0.241 | N | 0.563 | neutral | None | None | None | None | I |
E/M | 0.8737 | likely_pathogenic | 0.8769 | pathogenic | 0.189 | Stabilizing | 0.893 | D | 0.56 | neutral | None | None | None | None | I |
E/N | 0.5783 | likely_pathogenic | 0.6056 | pathogenic | -0.624 | Destabilizing | 0.388 | N | 0.467 | neutral | None | None | None | None | I |
E/P | 0.9808 | likely_pathogenic | 0.9796 | pathogenic | -0.171 | Destabilizing | 0.932 | D | 0.534 | neutral | None | None | None | None | I |
E/Q | 0.3401 | ambiguous | 0.3513 | ambiguous | -0.531 | Destabilizing | 0.492 | N | 0.503 | neutral | N | 0.49571653 | None | None | I |
E/R | 0.6723 | likely_pathogenic | 0.6892 | pathogenic | 0.183 | Stabilizing | 0.818 | D | 0.483 | neutral | None | None | None | None | I |
E/S | 0.5002 | ambiguous | 0.5181 | ambiguous | -0.82 | Destabilizing | 0.388 | N | 0.444 | neutral | None | None | None | None | I |
E/T | 0.6081 | likely_pathogenic | 0.6272 | pathogenic | -0.59 | Destabilizing | 0.388 | N | 0.488 | neutral | None | None | None | None | I |
E/V | 0.6071 | likely_pathogenic | 0.6235 | pathogenic | -0.171 | Destabilizing | 0.001 | N | 0.4 | neutral | N | 0.513021411 | None | None | I |
E/W | 0.9948 | likely_pathogenic | 0.9953 | pathogenic | 0.045 | Stabilizing | 0.981 | D | 0.632 | neutral | None | None | None | None | I |
E/Y | 0.9525 | likely_pathogenic | 0.9562 | pathogenic | 0.036 | Stabilizing | 0.818 | D | 0.581 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.