Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14881 | 44866;44867;44868 | chr2:178624639;178624638;178624637 | chr2:179489366;179489365;179489364 |
N2AB | 13240 | 39943;39944;39945 | chr2:178624639;178624638;178624637 | chr2:179489366;179489365;179489364 |
N2A | 12313 | 37162;37163;37164 | chr2:178624639;178624638;178624637 | chr2:179489366;179489365;179489364 |
N2B | 5816 | 17671;17672;17673 | chr2:178624639;178624638;178624637 | chr2:179489366;179489365;179489364 |
Novex-1 | 5941 | 18046;18047;18048 | chr2:178624639;178624638;178624637 | chr2:179489366;179489365;179489364 |
Novex-2 | 6008 | 18247;18248;18249 | chr2:178624639;178624638;178624637 | chr2:179489366;179489365;179489364 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/V | rs780650251 | -0.366 | 0.919 | N | 0.651 | 0.334 | 0.492749560936 | gnomAD-2.1.1 | 1.21E-05 | None | None | None | None | N | None | 0 | 8.72E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
A/V | rs780650251 | -0.366 | 0.919 | N | 0.651 | 0.334 | 0.492749560936 | gnomAD-4.0.0 | 6.37519E-06 | None | None | None | None | N | None | 0 | 6.87285E-05 | None | 0 | 0 | None | 0 | 0 | 2.86272E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.8657 | likely_pathogenic | 0.8441 | pathogenic | -0.78 | Destabilizing | 1.0 | D | 0.753 | deleterious | None | None | None | None | N |
A/D | 0.9142 | likely_pathogenic | 0.8846 | pathogenic | -0.943 | Destabilizing | 0.988 | D | 0.777 | deleterious | D | 0.724245643 | None | None | N |
A/E | 0.8832 | likely_pathogenic | 0.8337 | pathogenic | -1.045 | Destabilizing | 0.991 | D | 0.807 | deleterious | None | None | None | None | N |
A/F | 0.9195 | likely_pathogenic | 0.8942 | pathogenic | -1.021 | Destabilizing | 0.995 | D | 0.771 | deleterious | None | None | None | None | N |
A/G | 0.4723 | ambiguous | 0.4262 | ambiguous | -0.869 | Destabilizing | 0.958 | D | 0.615 | neutral | D | 0.55211498 | None | None | N |
A/H | 0.9527 | likely_pathogenic | 0.9404 | pathogenic | -0.986 | Destabilizing | 1.0 | D | 0.705 | prob.neutral | None | None | None | None | N |
A/I | 0.8521 | likely_pathogenic | 0.7727 | pathogenic | -0.428 | Destabilizing | 0.991 | D | 0.814 | deleterious | None | None | None | None | N |
A/K | 0.9741 | likely_pathogenic | 0.9587 | pathogenic | -1.141 | Destabilizing | 0.991 | D | 0.811 | deleterious | None | None | None | None | N |
A/L | 0.7785 | likely_pathogenic | 0.7309 | pathogenic | -0.428 | Destabilizing | 0.938 | D | 0.698 | prob.neutral | None | None | None | None | N |
A/M | 0.8758 | likely_pathogenic | 0.8123 | pathogenic | -0.331 | Destabilizing | 0.999 | D | 0.729 | prob.delet. | None | None | None | None | N |
A/N | 0.9057 | likely_pathogenic | 0.877 | pathogenic | -0.721 | Destabilizing | 0.991 | D | 0.767 | deleterious | None | None | None | None | N |
A/P | 0.9058 | likely_pathogenic | 0.8953 | pathogenic | -0.48 | Destabilizing | 0.994 | D | 0.806 | deleterious | N | 0.473198857 | None | None | N |
A/Q | 0.889 | likely_pathogenic | 0.8503 | pathogenic | -0.968 | Destabilizing | 0.995 | D | 0.795 | deleterious | None | None | None | None | N |
A/R | 0.9337 | likely_pathogenic | 0.9107 | pathogenic | -0.667 | Destabilizing | 0.991 | D | 0.799 | deleterious | None | None | None | None | N |
A/S | 0.2788 | likely_benign | 0.2268 | benign | -0.98 | Destabilizing | 0.919 | D | 0.545 | neutral | D | 0.548198286 | None | None | N |
A/T | 0.4788 | ambiguous | 0.3543 | ambiguous | -0.999 | Destabilizing | 0.142 | N | 0.423 | neutral | N | 0.509808864 | None | None | N |
A/V | 0.6077 | likely_pathogenic | 0.4804 | ambiguous | -0.48 | Destabilizing | 0.919 | D | 0.651 | neutral | N | 0.507929475 | None | None | N |
A/W | 0.9853 | likely_pathogenic | 0.9815 | pathogenic | -1.25 | Destabilizing | 1.0 | D | 0.701 | prob.neutral | None | None | None | None | N |
A/Y | 0.9547 | likely_pathogenic | 0.9438 | pathogenic | -0.902 | Destabilizing | 1.0 | D | 0.764 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.