Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14882 | 44869;44870;44871 | chr2:178624636;178624635;178624634 | chr2:179489363;179489362;179489361 |
N2AB | 13241 | 39946;39947;39948 | chr2:178624636;178624635;178624634 | chr2:179489363;179489362;179489361 |
N2A | 12314 | 37165;37166;37167 | chr2:178624636;178624635;178624634 | chr2:179489363;179489362;179489361 |
N2B | 5817 | 17674;17675;17676 | chr2:178624636;178624635;178624634 | chr2:179489363;179489362;179489361 |
Novex-1 | 5942 | 18049;18050;18051 | chr2:178624636;178624635;178624634 | chr2:179489363;179489362;179489361 |
Novex-2 | 6009 | 18250;18251;18252 | chr2:178624636;178624635;178624634 | chr2:179489363;179489362;179489361 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/T | rs988336748 | None | 0.684 | N | 0.507 | 0.311 | 0.36256342048 | gnomAD-2.1.1 | 3.19E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 6.49E-05 | 0 |
K/T | rs988336748 | None | 0.684 | N | 0.507 | 0.311 | 0.36256342048 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
K/T | rs988336748 | None | 0.684 | N | 0.507 | 0.311 | 0.36256342048 | gnomAD-4.0.0 | 2.48061E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.39227E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.2823 | likely_benign | 0.1886 | benign | 0.012 | Stabilizing | 0.373 | N | 0.453 | neutral | None | None | None | None | N |
K/C | 0.8669 | likely_pathogenic | 0.7892 | pathogenic | -0.412 | Destabilizing | 0.996 | D | 0.461 | neutral | None | None | None | None | N |
K/D | 0.4262 | ambiguous | 0.3096 | benign | -0.324 | Destabilizing | 0.009 | N | 0.241 | neutral | None | None | None | None | N |
K/E | 0.1657 | likely_benign | 0.1046 | benign | -0.342 | Destabilizing | 0.001 | N | 0.181 | neutral | N | 0.432368553 | None | None | N |
K/F | 0.8578 | likely_pathogenic | 0.7865 | pathogenic | -0.338 | Destabilizing | 0.984 | D | 0.471 | neutral | None | None | None | None | N |
K/G | 0.522 | ambiguous | 0.381 | ambiguous | -0.108 | Destabilizing | 0.742 | D | 0.495 | neutral | None | None | None | None | N |
K/H | 0.41 | ambiguous | 0.3309 | benign | -0.213 | Destabilizing | 0.953 | D | 0.507 | neutral | None | None | None | None | N |
K/I | 0.3867 | ambiguous | 0.2986 | benign | 0.245 | Stabilizing | 0.953 | D | 0.492 | neutral | None | None | None | None | N |
K/L | 0.4044 | ambiguous | 0.3031 | benign | 0.245 | Stabilizing | 0.742 | D | 0.534 | neutral | None | None | None | None | N |
K/M | 0.2978 | likely_benign | 0.2148 | benign | -0.091 | Destabilizing | 0.994 | D | 0.484 | neutral | D | 0.561232636 | None | None | N |
K/N | 0.3537 | ambiguous | 0.2687 | benign | 0.041 | Stabilizing | 0.684 | D | 0.459 | neutral | N | 0.495984221 | None | None | N |
K/P | 0.4244 | ambiguous | 0.301 | benign | 0.19 | Stabilizing | 0.009 | N | 0.261 | neutral | None | None | None | None | N |
K/Q | 0.188 | likely_benign | 0.1349 | benign | -0.113 | Destabilizing | 0.521 | D | 0.458 | neutral | N | 0.498737994 | None | None | N |
K/R | 0.1187 | likely_benign | 0.1042 | benign | -0.111 | Destabilizing | 0.684 | D | 0.457 | neutral | N | 0.500149132 | None | None | N |
K/S | 0.3739 | ambiguous | 0.2722 | benign | -0.312 | Destabilizing | 0.543 | D | 0.434 | neutral | None | None | None | None | N |
K/T | 0.1606 | likely_benign | 0.1161 | benign | -0.219 | Destabilizing | 0.684 | D | 0.507 | neutral | N | 0.495592617 | None | None | N |
K/V | 0.3004 | likely_benign | 0.2246 | benign | 0.19 | Stabilizing | 0.854 | D | 0.525 | neutral | None | None | None | None | N |
K/W | 0.8936 | likely_pathogenic | 0.8255 | pathogenic | -0.443 | Destabilizing | 0.996 | D | 0.504 | neutral | None | None | None | None | N |
K/Y | 0.7586 | likely_pathogenic | 0.686 | pathogenic | -0.094 | Destabilizing | 0.984 | D | 0.491 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.