Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14906 | 44941;44942;44943 | chr2:178624564;178624563;178624562 | chr2:179489291;179489290;179489289 |
N2AB | 13265 | 40018;40019;40020 | chr2:178624564;178624563;178624562 | chr2:179489291;179489290;179489289 |
N2A | 12338 | 37237;37238;37239 | chr2:178624564;178624563;178624562 | chr2:179489291;179489290;179489289 |
N2B | 5841 | 17746;17747;17748 | chr2:178624564;178624563;178624562 | chr2:179489291;179489290;179489289 |
Novex-1 | 5966 | 18121;18122;18123 | chr2:178624564;178624563;178624562 | chr2:179489291;179489290;179489289 |
Novex-2 | 6033 | 18322;18323;18324 | chr2:178624564;178624563;178624562 | chr2:179489291;179489290;179489289 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/L | None | None | 0.906 | N | 0.477 | 0.218 | 0.410734915765 | gnomAD-4.0.0 | 1.59336E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.78164E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.3509 | ambiguous | 0.3136 | benign | -1.735 | Destabilizing | 0.826 | D | 0.421 | neutral | N | 0.504486228 | None | None | N |
V/C | 0.8064 | likely_pathogenic | 0.8205 | pathogenic | -1.198 | Destabilizing | 0.999 | D | 0.497 | neutral | None | None | None | None | N |
V/D | 0.528 | ambiguous | 0.5131 | ambiguous | -2.314 | Highly Destabilizing | 0.988 | D | 0.616 | neutral | N | 0.504080339 | None | None | N |
V/E | 0.3713 | ambiguous | 0.3469 | ambiguous | -2.32 | Highly Destabilizing | 0.939 | D | 0.567 | neutral | None | None | None | None | N |
V/F | 0.2065 | likely_benign | 0.1924 | benign | -1.413 | Destabilizing | 0.996 | D | 0.543 | neutral | N | 0.502374388 | None | None | N |
V/G | 0.3073 | likely_benign | 0.2928 | benign | -2.044 | Highly Destabilizing | 0.959 | D | 0.594 | neutral | N | 0.506924587 | None | None | N |
V/H | 0.5801 | likely_pathogenic | 0.5616 | ambiguous | -1.602 | Destabilizing | 0.999 | D | 0.607 | neutral | None | None | None | None | N |
V/I | 0.0841 | likely_benign | 0.0829 | benign | -0.969 | Destabilizing | 0.986 | D | 0.474 | neutral | N | 0.459485943 | None | None | N |
V/K | 0.2347 | likely_benign | 0.2299 | benign | -1.503 | Destabilizing | 0.079 | N | 0.294 | neutral | None | None | None | None | N |
V/L | 0.2321 | likely_benign | 0.2221 | benign | -0.969 | Destabilizing | 0.906 | D | 0.477 | neutral | N | 0.484499307 | None | None | N |
V/M | 0.2047 | likely_benign | 0.1951 | benign | -0.692 | Destabilizing | 0.997 | D | 0.473 | neutral | None | None | None | None | N |
V/N | 0.3588 | ambiguous | 0.3409 | ambiguous | -1.349 | Destabilizing | 0.991 | D | 0.616 | neutral | None | None | None | None | N |
V/P | 0.9173 | likely_pathogenic | 0.9139 | pathogenic | -1.194 | Destabilizing | 0.997 | D | 0.592 | neutral | None | None | None | None | N |
V/Q | 0.3105 | likely_benign | 0.2915 | benign | -1.58 | Destabilizing | 0.982 | D | 0.585 | neutral | None | None | None | None | N |
V/R | 0.2559 | likely_benign | 0.249 | benign | -0.901 | Destabilizing | 0.046 | N | 0.449 | neutral | None | None | None | None | N |
V/S | 0.3451 | ambiguous | 0.3157 | benign | -1.756 | Destabilizing | 0.939 | D | 0.567 | neutral | None | None | None | None | N |
V/T | 0.2802 | likely_benign | 0.2681 | benign | -1.671 | Destabilizing | 0.969 | D | 0.445 | neutral | None | None | None | None | N |
V/W | 0.8167 | likely_pathogenic | 0.8308 | pathogenic | -1.642 | Destabilizing | 0.999 | D | 0.652 | neutral | None | None | None | None | N |
V/Y | 0.5639 | ambiguous | 0.5606 | ambiguous | -1.383 | Destabilizing | 0.997 | D | 0.541 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.