Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14910 | 44953;44954;44955 | chr2:178624552;178624551;178624550 | chr2:179489279;179489278;179489277 |
N2AB | 13269 | 40030;40031;40032 | chr2:178624552;178624551;178624550 | chr2:179489279;179489278;179489277 |
N2A | 12342 | 37249;37250;37251 | chr2:178624552;178624551;178624550 | chr2:179489279;179489278;179489277 |
N2B | 5845 | 17758;17759;17760 | chr2:178624552;178624551;178624550 | chr2:179489279;179489278;179489277 |
Novex-1 | 5970 | 18133;18134;18135 | chr2:178624552;178624551;178624550 | chr2:179489279;179489278;179489277 |
Novex-2 | 6037 | 18334;18335;18336 | chr2:178624552;178624551;178624550 | chr2:179489279;179489278;179489277 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/L | None | None | None | N | 0.237 | 0.132 | 0.441949972293 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.75482E-04 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.4083 | ambiguous | 0.39 | ambiguous | -2.184 | Highly Destabilizing | 0.052 | N | 0.585 | neutral | D | 0.552898589 | None | None | N |
V/C | 0.7752 | likely_pathogenic | 0.7036 | pathogenic | -1.565 | Destabilizing | 0.935 | D | 0.612 | neutral | None | None | None | None | N |
V/D | 0.6696 | likely_pathogenic | 0.6214 | pathogenic | -2.733 | Highly Destabilizing | 0.484 | N | 0.69 | prob.neutral | D | 0.577890796 | None | None | N |
V/E | 0.4422 | ambiguous | 0.4266 | ambiguous | -2.578 | Highly Destabilizing | 0.555 | D | 0.642 | neutral | None | None | None | None | N |
V/F | 0.1857 | likely_benign | 0.1595 | benign | -1.346 | Destabilizing | 0.317 | N | 0.655 | neutral | D | 0.544891379 | None | None | N |
V/G | 0.5651 | likely_pathogenic | 0.5137 | ambiguous | -2.656 | Highly Destabilizing | 0.484 | N | 0.681 | prob.neutral | D | 0.703658959 | None | None | N |
V/H | 0.558 | ambiguous | 0.4754 | ambiguous | -2.352 | Highly Destabilizing | 0.935 | D | 0.655 | neutral | None | None | None | None | N |
V/I | 0.0564 | likely_benign | 0.0527 | benign | -0.888 | Destabilizing | None | N | 0.185 | neutral | N | 0.461997609 | None | None | N |
V/K | 0.4019 | ambiguous | 0.3597 | ambiguous | -1.955 | Destabilizing | 0.555 | D | 0.64 | neutral | None | None | None | None | N |
V/L | 0.1448 | likely_benign | 0.113 | benign | -0.888 | Destabilizing | None | N | 0.237 | neutral | N | 0.510168819 | None | None | N |
V/M | 0.1733 | likely_benign | 0.1437 | benign | -0.765 | Destabilizing | 0.38 | N | 0.659 | neutral | None | None | None | None | N |
V/N | 0.4038 | ambiguous | 0.3358 | benign | -2.08 | Highly Destabilizing | 0.791 | D | 0.687 | prob.neutral | None | None | None | None | N |
V/P | 0.963 | likely_pathogenic | 0.9498 | pathogenic | -1.293 | Destabilizing | 0.791 | D | 0.646 | neutral | None | None | None | None | N |
V/Q | 0.4268 | ambiguous | 0.3786 | ambiguous | -2.029 | Highly Destabilizing | 0.791 | D | 0.613 | neutral | None | None | None | None | N |
V/R | 0.311 | likely_benign | 0.2759 | benign | -1.59 | Destabilizing | 0.555 | D | 0.691 | prob.neutral | None | None | None | None | N |
V/S | 0.427 | ambiguous | 0.3885 | ambiguous | -2.645 | Highly Destabilizing | 0.262 | N | 0.647 | neutral | None | None | None | None | N |
V/T | 0.3069 | likely_benign | 0.2994 | benign | -2.373 | Highly Destabilizing | 0.149 | N | 0.623 | neutral | None | None | None | None | N |
V/W | 0.816 | likely_pathogenic | 0.7586 | pathogenic | -1.845 | Destabilizing | 0.935 | D | 0.679 | prob.neutral | None | None | None | None | N |
V/Y | 0.5346 | ambiguous | 0.4561 | ambiguous | -1.524 | Destabilizing | 0.555 | D | 0.653 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.