Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14911 | 44956;44957;44958 | chr2:178624549;178624548;178624547 | chr2:179489276;179489275;179489274 |
N2AB | 13270 | 40033;40034;40035 | chr2:178624549;178624548;178624547 | chr2:179489276;179489275;179489274 |
N2A | 12343 | 37252;37253;37254 | chr2:178624549;178624548;178624547 | chr2:179489276;179489275;179489274 |
N2B | 5846 | 17761;17762;17763 | chr2:178624549;178624548;178624547 | chr2:179489276;179489275;179489274 |
Novex-1 | 5971 | 18136;18137;18138 | chr2:178624549;178624548;178624547 | chr2:179489276;179489275;179489274 |
Novex-2 | 6038 | 18337;18338;18339 | chr2:178624549;178624548;178624547 | chr2:179489276;179489275;179489274 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/K | rs754905274 | -2.611 | 0.999 | D | 0.821 | 0.837 | 0.939999114054 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 0 | 0 |
I/K | rs754905274 | -2.611 | 0.999 | D | 0.821 | 0.837 | 0.939999114054 | gnomAD-4.0.0 | 1.59342E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.4332E-05 | 0 |
I/M | rs751425454 | -1.48 | 0.998 | D | 0.665 | 0.612 | 0.73347288092 | gnomAD-2.1.1 | 3.23E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 2.61489E-04 | None | 0 | 0 | 0 |
I/M | rs751425454 | -1.48 | 0.998 | D | 0.665 | 0.612 | 0.73347288092 | gnomAD-4.0.0 | 1.43767E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 2.43523E-04 | 0 |
I/T | rs754905274 | -3.419 | 0.989 | D | 0.724 | 0.722 | 0.876608931427 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 6.46E-05 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
I/T | rs754905274 | -3.419 | 0.989 | D | 0.724 | 0.722 | 0.876608931427 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
I/T | rs754905274 | -3.419 | 0.989 | D | 0.724 | 0.722 | 0.876608931427 | gnomAD-4.0.0 | 6.57921E-06 | None | None | None | None | N | None | 2.41348E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.9748 | likely_pathogenic | 0.9818 | pathogenic | -2.966 | Highly Destabilizing | 0.992 | D | 0.671 | neutral | None | None | None | None | N |
I/C | 0.97 | likely_pathogenic | 0.9798 | pathogenic | -2.3 | Highly Destabilizing | 1.0 | D | 0.74 | deleterious | None | None | None | None | N |
I/D | 0.9984 | likely_pathogenic | 0.9988 | pathogenic | -3.688 | Highly Destabilizing | 1.0 | D | 0.822 | deleterious | None | None | None | None | N |
I/E | 0.9951 | likely_pathogenic | 0.9964 | pathogenic | -3.39 | Highly Destabilizing | 1.0 | D | 0.821 | deleterious | None | None | None | None | N |
I/F | 0.5984 | likely_pathogenic | 0.6614 | pathogenic | -1.701 | Destabilizing | 0.999 | D | 0.691 | prob.neutral | None | None | None | None | N |
I/G | 0.9952 | likely_pathogenic | 0.9964 | pathogenic | -3.531 | Highly Destabilizing | 1.0 | D | 0.821 | deleterious | None | None | None | None | N |
I/H | 0.9892 | likely_pathogenic | 0.9916 | pathogenic | -3.164 | Highly Destabilizing | 1.0 | D | 0.816 | deleterious | None | None | None | None | N |
I/K | 0.9847 | likely_pathogenic | 0.9886 | pathogenic | -2.332 | Highly Destabilizing | 0.999 | D | 0.821 | deleterious | D | 0.813863115 | None | None | N |
I/L | 0.3252 | likely_benign | 0.4111 | ambiguous | -1.255 | Destabilizing | 0.889 | D | 0.415 | neutral | D | 0.622503119 | None | None | N |
I/M | 0.4391 | ambiguous | 0.5289 | ambiguous | -1.467 | Destabilizing | 0.998 | D | 0.665 | neutral | D | 0.72452887 | None | None | N |
I/N | 0.9771 | likely_pathogenic | 0.9797 | pathogenic | -2.993 | Highly Destabilizing | 1.0 | D | 0.833 | deleterious | None | None | None | None | N |
I/P | 0.9964 | likely_pathogenic | 0.9972 | pathogenic | -1.819 | Destabilizing | 1.0 | D | 0.825 | deleterious | None | None | None | None | N |
I/Q | 0.9886 | likely_pathogenic | 0.9917 | pathogenic | -2.678 | Highly Destabilizing | 1.0 | D | 0.844 | deleterious | None | None | None | None | N |
I/R | 0.9766 | likely_pathogenic | 0.9812 | pathogenic | -2.261 | Highly Destabilizing | 0.999 | D | 0.84 | deleterious | D | 0.813863114 | None | None | N |
I/S | 0.974 | likely_pathogenic | 0.9777 | pathogenic | -3.522 | Highly Destabilizing | 0.999 | D | 0.789 | deleterious | None | None | None | None | N |
I/T | 0.9686 | likely_pathogenic | 0.9786 | pathogenic | -3.081 | Highly Destabilizing | 0.989 | D | 0.724 | prob.delet. | D | 0.722410158 | None | None | N |
I/V | 0.2371 | likely_benign | 0.2554 | benign | -1.819 | Destabilizing | 0.333 | N | 0.269 | neutral | D | 0.541592401 | None | None | N |
I/W | 0.9874 | likely_pathogenic | 0.9924 | pathogenic | -2.165 | Highly Destabilizing | 1.0 | D | 0.815 | deleterious | None | None | None | None | N |
I/Y | 0.9527 | likely_pathogenic | 0.9617 | pathogenic | -2.025 | Highly Destabilizing | 1.0 | D | 0.737 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.