Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14912 | 44959;44960;44961 | chr2:178624546;178624545;178624544 | chr2:179489273;179489272;179489271 |
N2AB | 13271 | 40036;40037;40038 | chr2:178624546;178624545;178624544 | chr2:179489273;179489272;179489271 |
N2A | 12344 | 37255;37256;37257 | chr2:178624546;178624545;178624544 | chr2:179489273;179489272;179489271 |
N2B | 5847 | 17764;17765;17766 | chr2:178624546;178624545;178624544 | chr2:179489273;179489272;179489271 |
Novex-1 | 5972 | 18139;18140;18141 | chr2:178624546;178624545;178624544 | chr2:179489273;179489272;179489271 |
Novex-2 | 6039 | 18340;18341;18342 | chr2:178624546;178624545;178624544 | chr2:179489273;179489272;179489271 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/P | rs2058749191 | None | 0.989 | N | 0.557 | 0.34 | 0.548571244948 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
H/P | rs2058749191 | None | 0.989 | N | 0.557 | 0.34 | 0.548571244948 | gnomAD-4.0.0 | 2.0302E-06 | None | None | None | None | N | None | 3.49491E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
H/Q | rs762830792 | 0.438 | 0.934 | N | 0.431 | 0.3 | 0.12205267543 | gnomAD-2.1.1 | 8.06E-06 | None | None | None | None | N | None | 0 | 5.81E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
H/Q | rs762830792 | 0.438 | 0.934 | N | 0.431 | 0.3 | 0.12205267543 | gnomAD-4.0.0 | 1.36921E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.79972E-06 | 0 | 0 |
H/R | None | None | 0.012 | N | 0.181 | 0.157 | 0.302459207581 | gnomAD-4.0.0 | 1.20033E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.31251E-06 | 0 | 0 |
H/Y | rs766391823 | 0.98 | 0.012 | N | 0.162 | 0.216 | None | gnomAD-2.1.1 | 5.73E-05 | None | None | None | None | N | None | 4.14E-05 | 1.1343E-04 | None | 3.87147E-04 | 0 | None | 0 | None | 0 | 5.49E-05 | 0 |
H/Y | rs766391823 | 0.98 | 0.012 | N | 0.162 | 0.216 | None | gnomAD-3.1.2 | 8.55E-05 | None | None | None | None | N | None | 2.41E-05 | 4.59861E-04 | 0 | 8.64553E-04 | 0 | None | 0 | 0 | 2.94E-05 | 0 | 0 |
H/Y | rs766391823 | 0.98 | 0.012 | N | 0.162 | 0.216 | None | gnomAD-4.0.0 | 5.58088E-05 | None | None | None | None | N | None | 1.33608E-05 | 1.83688E-04 | None | 5.07237E-04 | 0 | None | 0 | 0 | 4.91851E-05 | 0 | 8.0141E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/A | 0.2932 | likely_benign | 0.3733 | ambiguous | -0.46 | Destabilizing | 0.842 | D | 0.468 | neutral | None | None | None | None | N |
H/C | 0.2049 | likely_benign | 0.2078 | benign | 0.31 | Stabilizing | 0.998 | D | 0.577 | neutral | None | None | None | None | N |
H/D | 0.3018 | likely_benign | 0.3212 | benign | -0.318 | Destabilizing | 0.966 | D | 0.445 | neutral | N | 0.492594554 | None | None | N |
H/E | 0.2984 | likely_benign | 0.3351 | benign | -0.244 | Destabilizing | 0.842 | D | 0.375 | neutral | None | None | None | None | N |
H/F | 0.3575 | ambiguous | 0.4038 | ambiguous | 0.394 | Stabilizing | 0.904 | D | 0.449 | neutral | None | None | None | None | N |
H/G | 0.3227 | likely_benign | 0.3687 | ambiguous | -0.807 | Destabilizing | 0.915 | D | 0.499 | neutral | None | None | None | None | N |
H/I | 0.3381 | likely_benign | 0.4034 | ambiguous | 0.479 | Stabilizing | 0.949 | D | 0.575 | neutral | None | None | None | None | N |
H/K | 0.1442 | likely_benign | 0.1712 | benign | -0.323 | Destabilizing | 0.728 | D | 0.396 | neutral | None | None | None | None | N |
H/L | 0.1323 | likely_benign | 0.1487 | benign | 0.479 | Stabilizing | 0.669 | D | 0.51 | neutral | N | 0.471590639 | None | None | N |
H/M | 0.4434 | ambiguous | 0.5336 | ambiguous | 0.393 | Stabilizing | 0.998 | D | 0.538 | neutral | None | None | None | None | N |
H/N | 0.1195 | likely_benign | 0.1356 | benign | -0.245 | Destabilizing | 0.801 | D | 0.469 | neutral | N | 0.442552334 | None | None | N |
H/P | 0.2674 | likely_benign | 0.2931 | benign | 0.188 | Stabilizing | 0.989 | D | 0.557 | neutral | N | 0.499406092 | None | None | N |
H/Q | 0.153 | likely_benign | 0.1811 | benign | -0.038 | Destabilizing | 0.934 | D | 0.431 | neutral | N | 0.492979428 | None | None | N |
H/R | 0.0738 | likely_benign | 0.0718 | benign | -0.829 | Destabilizing | 0.012 | N | 0.181 | neutral | N | 0.454887187 | None | None | N |
H/S | 0.2301 | likely_benign | 0.2809 | benign | -0.267 | Destabilizing | 0.842 | D | 0.449 | neutral | None | None | None | None | N |
H/T | 0.2269 | likely_benign | 0.3077 | benign | -0.096 | Destabilizing | 0.974 | D | 0.483 | neutral | None | None | None | None | N |
H/V | 0.2896 | likely_benign | 0.3592 | ambiguous | 0.188 | Stabilizing | 0.949 | D | 0.498 | neutral | None | None | None | None | N |
H/W | 0.3488 | ambiguous | 0.3498 | ambiguous | 0.506 | Stabilizing | 0.993 | D | 0.544 | neutral | None | None | None | None | N |
H/Y | 0.1185 | likely_benign | 0.1235 | benign | 0.761 | Stabilizing | 0.012 | N | 0.162 | neutral | N | 0.49977608 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.