Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14923 | 44992;44993;44994 | chr2:178624513;178624512;178624511 | chr2:179489240;179489239;179489238 |
N2AB | 13282 | 40069;40070;40071 | chr2:178624513;178624512;178624511 | chr2:179489240;179489239;179489238 |
N2A | 12355 | 37288;37289;37290 | chr2:178624513;178624512;178624511 | chr2:179489240;179489239;179489238 |
N2B | 5858 | 17797;17798;17799 | chr2:178624513;178624512;178624511 | chr2:179489240;179489239;179489238 |
Novex-1 | 5983 | 18172;18173;18174 | chr2:178624513;178624512;178624511 | chr2:179489240;179489239;179489238 |
Novex-2 | 6050 | 18373;18374;18375 | chr2:178624513;178624512;178624511 | chr2:179489240;179489239;179489238 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/S | rs760857643 | -1.514 | 0.955 | N | 0.482 | 0.174 | 0.240491677333 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.93E-06 | 0 |
T/S | rs760857643 | -1.514 | 0.955 | N | 0.482 | 0.174 | 0.240491677333 | gnomAD-4.0.0 | 1.36929E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.79987E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.2812 | likely_benign | 0.1691 | benign | -1.368 | Destabilizing | 0.117 | N | 0.34 | neutral | N | 0.392843886 | None | None | N |
T/C | 0.8037 | likely_pathogenic | 0.6959 | pathogenic | -0.812 | Destabilizing | 1.0 | D | 0.772 | deleterious | None | None | None | None | N |
T/D | 0.8403 | likely_pathogenic | 0.8163 | pathogenic | -1.637 | Destabilizing | 0.998 | D | 0.748 | deleterious | None | None | None | None | N |
T/E | 0.6655 | likely_pathogenic | 0.6837 | pathogenic | -1.382 | Destabilizing | 0.995 | D | 0.711 | prob.delet. | None | None | None | None | N |
T/F | 0.5955 | likely_pathogenic | 0.528 | ambiguous | -1.0 | Destabilizing | 0.998 | D | 0.815 | deleterious | None | None | None | None | N |
T/G | 0.7087 | likely_pathogenic | 0.5605 | ambiguous | -1.794 | Destabilizing | 0.966 | D | 0.621 | neutral | None | None | None | None | N |
T/H | 0.5725 | likely_pathogenic | 0.5457 | ambiguous | -1.708 | Destabilizing | 1.0 | D | 0.799 | deleterious | None | None | None | None | N |
T/I | 0.3657 | ambiguous | 0.3748 | ambiguous | -0.221 | Destabilizing | 0.993 | D | 0.75 | deleterious | N | 0.405387493 | None | None | N |
T/K | 0.623 | likely_pathogenic | 0.6369 | pathogenic | -0.119 | Destabilizing | 0.995 | D | 0.706 | prob.neutral | None | None | None | None | N |
T/L | 0.3676 | ambiguous | 0.299 | benign | -0.221 | Destabilizing | 0.983 | D | 0.557 | neutral | None | None | None | None | N |
T/M | 0.2397 | likely_benign | 0.186 | benign | -0.361 | Destabilizing | 1.0 | D | 0.77 | deleterious | None | None | None | None | N |
T/N | 0.4438 | ambiguous | 0.3947 | ambiguous | -0.956 | Destabilizing | 0.997 | D | 0.672 | neutral | N | 0.481980813 | None | None | N |
T/P | 0.9269 | likely_pathogenic | 0.9139 | pathogenic | -0.576 | Destabilizing | 0.997 | D | 0.775 | deleterious | D | 0.553167403 | None | None | N |
T/Q | 0.5326 | ambiguous | 0.5105 | ambiguous | -0.654 | Destabilizing | 0.998 | D | 0.793 | deleterious | None | None | None | None | N |
T/R | 0.4978 | ambiguous | 0.475 | ambiguous | -0.476 | Destabilizing | 0.998 | D | 0.765 | deleterious | None | None | None | None | N |
T/S | 0.2661 | likely_benign | 0.1927 | benign | -1.229 | Destabilizing | 0.955 | D | 0.482 | neutral | N | 0.346376975 | None | None | N |
T/V | 0.3185 | likely_benign | 0.283 | benign | -0.576 | Destabilizing | 0.966 | D | 0.458 | neutral | None | None | None | None | N |
T/W | 0.8839 | likely_pathogenic | 0.8689 | pathogenic | -1.141 | Destabilizing | 1.0 | D | 0.789 | deleterious | None | None | None | None | N |
T/Y | 0.647 | likely_pathogenic | 0.5976 | pathogenic | -0.747 | Destabilizing | 0.999 | D | 0.815 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.