Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14946 | 45061;45062;45063 | chr2:178622747;178622746;178622745 | chr2:179487474;179487473;179487472 |
N2AB | 13305 | 40138;40139;40140 | chr2:178622747;178622746;178622745 | chr2:179487474;179487473;179487472 |
N2A | 12378 | 37357;37358;37359 | chr2:178622747;178622746;178622745 | chr2:179487474;179487473;179487472 |
N2B | 5881 | 17866;17867;17868 | chr2:178622747;178622746;178622745 | chr2:179487474;179487473;179487472 |
Novex-1 | 6006 | 18241;18242;18243 | chr2:178622747;178622746;178622745 | chr2:179487474;179487473;179487472 |
Novex-2 | 6073 | 18442;18443;18444 | chr2:178622747;178622746;178622745 | chr2:179487474;179487473;179487472 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/K | rs1291314776 | 0.031 | 0.002 | N | 0.146 | 0.126 | 0.298056030225 | gnomAD-2.1.1 | 4.28E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 9.46E-06 | 0 |
R/K | rs1291314776 | 0.031 | 0.002 | N | 0.146 | 0.126 | 0.298056030225 | gnomAD-4.0.0 | 4.13487E-06 | None | None | None | None | N | None | 3.01277E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 4.51743E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/A | 0.4939 | ambiguous | 0.422 | ambiguous | -0.077 | Destabilizing | 0.688 | D | 0.373 | neutral | None | None | None | None | N |
R/C | 0.2519 | likely_benign | 0.2295 | benign | -0.083 | Destabilizing | 0.998 | D | 0.43 | neutral | None | None | None | None | N |
R/D | 0.7711 | likely_pathogenic | 0.7065 | pathogenic | 0.083 | Stabilizing | 0.842 | D | 0.441 | neutral | None | None | None | None | N |
R/E | 0.4432 | ambiguous | 0.3616 | ambiguous | 0.201 | Stabilizing | 0.525 | D | 0.362 | neutral | None | None | None | None | N |
R/F | 0.6397 | likely_pathogenic | 0.589 | pathogenic | 0.036 | Stabilizing | 0.991 | D | 0.449 | neutral | None | None | None | None | N |
R/G | 0.372 | ambiguous | 0.2899 | benign | -0.366 | Destabilizing | 0.801 | D | 0.427 | neutral | N | 0.513443363 | None | None | N |
R/H | 0.0997 | likely_benign | 0.0957 | benign | -0.89 | Destabilizing | 0.991 | D | 0.458 | neutral | None | None | None | None | N |
R/I | 0.2968 | likely_benign | 0.2551 | benign | 0.678 | Stabilizing | 0.966 | D | 0.462 | neutral | N | 0.509887104 | None | None | N |
R/K | 0.0976 | likely_benign | 0.0898 | benign | -0.095 | Destabilizing | 0.002 | N | 0.146 | neutral | N | 0.362828874 | None | None | N |
R/L | 0.2543 | likely_benign | 0.2238 | benign | 0.678 | Stabilizing | 0.842 | D | 0.427 | neutral | None | None | None | None | N |
R/M | 0.3329 | likely_benign | 0.2818 | benign | 0.119 | Stabilizing | 0.991 | D | 0.453 | neutral | None | None | None | None | N |
R/N | 0.5756 | likely_pathogenic | 0.5277 | ambiguous | 0.239 | Stabilizing | 0.842 | D | 0.365 | neutral | None | None | None | None | N |
R/P | 0.8939 | likely_pathogenic | 0.8399 | pathogenic | 0.449 | Stabilizing | 0.915 | D | 0.477 | neutral | None | None | None | None | N |
R/Q | 0.1155 | likely_benign | 0.1055 | benign | 0.184 | Stabilizing | 0.842 | D | 0.381 | neutral | None | None | None | None | N |
R/S | 0.514 | ambiguous | 0.4415 | ambiguous | -0.221 | Destabilizing | 0.625 | D | 0.395 | neutral | N | 0.495074694 | None | None | N |
R/T | 0.2641 | likely_benign | 0.2131 | benign | 0.067 | Stabilizing | 0.801 | D | 0.422 | neutral | N | 0.482954944 | None | None | N |
R/V | 0.3976 | ambiguous | 0.3568 | ambiguous | 0.449 | Stabilizing | 0.915 | D | 0.477 | neutral | None | None | None | None | N |
R/W | 0.2846 | likely_benign | 0.2386 | benign | 0.144 | Stabilizing | 0.998 | D | 0.449 | neutral | None | None | None | None | N |
R/Y | 0.488 | ambiguous | 0.4617 | ambiguous | 0.496 | Stabilizing | 0.991 | D | 0.455 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.