Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14954 | 45085;45086;45087 | chr2:178622723;178622722;178622721 | chr2:179487450;179487449;179487448 |
N2AB | 13313 | 40162;40163;40164 | chr2:178622723;178622722;178622721 | chr2:179487450;179487449;179487448 |
N2A | 12386 | 37381;37382;37383 | chr2:178622723;178622722;178622721 | chr2:179487450;179487449;179487448 |
N2B | 5889 | 17890;17891;17892 | chr2:178622723;178622722;178622721 | chr2:179487450;179487449;179487448 |
Novex-1 | 6014 | 18265;18266;18267 | chr2:178622723;178622722;178622721 | chr2:179487450;179487449;179487448 |
Novex-2 | 6081 | 18466;18467;18468 | chr2:178622723;178622722;178622721 | chr2:179487450;179487449;179487448 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/K | rs2058479369 | None | None | N | 0.189 | 0.136 | 0.1749357433 | gnomAD-4.0.0 | 6.87264E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.01921E-07 | 0 | 0 |
R/T | None | None | 0.014 | N | 0.357 | 0.154 | 0.198526703765 | gnomAD-4.0.0 | 6.87264E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.01921E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/A | 0.2681 | likely_benign | 0.2921 | benign | 0.038 | Stabilizing | 0.002 | N | 0.292 | neutral | None | None | None | None | I |
R/C | 0.3567 | ambiguous | 0.4475 | ambiguous | -0.276 | Destabilizing | 0.497 | N | 0.402 | neutral | None | None | None | None | I |
R/D | 0.589 | likely_pathogenic | 0.6174 | pathogenic | -0.373 | Destabilizing | 0.004 | N | 0.398 | neutral | None | None | None | None | I |
R/E | 0.2397 | likely_benign | 0.2505 | benign | -0.334 | Destabilizing | None | N | 0.183 | neutral | None | None | None | None | I |
R/F | 0.5907 | likely_pathogenic | 0.6283 | pathogenic | -0.27 | Destabilizing | 0.085 | N | 0.438 | neutral | None | None | None | None | I |
R/G | 0.1947 | likely_benign | 0.207 | benign | -0.098 | Destabilizing | 0.014 | N | 0.395 | neutral | N | 0.509303387 | None | None | I |
R/H | 0.1622 | likely_benign | 0.1896 | benign | -0.574 | Destabilizing | 0.245 | N | 0.296 | neutral | None | None | None | None | I |
R/I | 0.2851 | likely_benign | 0.3083 | benign | 0.352 | Stabilizing | None | N | 0.275 | neutral | N | 0.488408615 | None | None | I |
R/K | 0.0558 | likely_benign | 0.0557 | benign | -0.205 | Destabilizing | None | N | 0.189 | neutral | N | 0.405197741 | None | None | I |
R/L | 0.2116 | likely_benign | 0.2368 | benign | 0.352 | Stabilizing | 0.004 | N | 0.34 | neutral | None | None | None | None | I |
R/M | 0.2149 | likely_benign | 0.2332 | benign | -0.104 | Destabilizing | 0.245 | N | 0.382 | neutral | None | None | None | None | I |
R/N | 0.4219 | ambiguous | 0.4358 | ambiguous | -0.132 | Destabilizing | 0.018 | N | 0.296 | neutral | None | None | None | None | I |
R/P | 0.3988 | ambiguous | 0.4165 | ambiguous | 0.265 | Stabilizing | None | N | 0.24 | neutral | None | None | None | None | I |
R/Q | 0.1071 | likely_benign | 0.1148 | benign | -0.16 | Destabilizing | 0.009 | N | 0.295 | neutral | None | None | None | None | I |
R/S | 0.3449 | ambiguous | 0.3661 | ambiguous | -0.281 | Destabilizing | 0.003 | N | 0.316 | neutral | N | 0.486145813 | None | None | I |
R/T | 0.1831 | likely_benign | 0.1927 | benign | -0.139 | Destabilizing | 0.014 | N | 0.357 | neutral | N | 0.439287755 | None | None | I |
R/V | 0.3195 | likely_benign | 0.3463 | ambiguous | 0.265 | Stabilizing | 0.004 | N | 0.408 | neutral | None | None | None | None | I |
R/W | 0.2629 | likely_benign | 0.2905 | benign | -0.46 | Destabilizing | 0.788 | D | 0.398 | neutral | None | None | None | None | I |
R/Y | 0.5091 | ambiguous | 0.5419 | ambiguous | -0.061 | Destabilizing | 0.085 | N | 0.428 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.