Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14987 | 45184;45185;45186 | chr2:178621963;178621962;178621961 | chr2:179486690;179486689;179486688 |
N2AB | 13346 | 40261;40262;40263 | chr2:178621963;178621962;178621961 | chr2:179486690;179486689;179486688 |
N2A | 12419 | 37480;37481;37482 | chr2:178621963;178621962;178621961 | chr2:179486690;179486689;179486688 |
N2B | 5922 | 17989;17990;17991 | chr2:178621963;178621962;178621961 | chr2:179486690;179486689;179486688 |
Novex-1 | 6047 | 18364;18365;18366 | chr2:178621963;178621962;178621961 | chr2:179486690;179486689;179486688 |
Novex-2 | 6114 | 18565;18566;18567 | chr2:178621963;178621962;178621961 | chr2:179486690;179486689;179486688 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/C | None | None | 1.0 | D | 0.782 | 0.607 | 0.662894048667 | gnomAD-4.0.0 | 1.20033E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.31251E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/A | 0.8991 | likely_pathogenic | 0.9272 | pathogenic | -2.959 | Highly Destabilizing | 1.0 | D | 0.726 | prob.delet. | None | None | None | None | N |
Y/C | 0.3938 | ambiguous | 0.4894 | ambiguous | -2.026 | Highly Destabilizing | 1.0 | D | 0.782 | deleterious | D | 0.621954501 | None | None | N |
Y/D | 0.9323 | likely_pathogenic | 0.9558 | pathogenic | -2.864 | Highly Destabilizing | 1.0 | D | 0.831 | deleterious | D | 0.73747413 | None | None | N |
Y/E | 0.9667 | likely_pathogenic | 0.9814 | pathogenic | -2.69 | Highly Destabilizing | 1.0 | D | 0.79 | deleterious | None | None | None | None | N |
Y/F | 0.2339 | likely_benign | 0.2726 | benign | -1.16 | Destabilizing | 0.999 | D | 0.485 | neutral | N | 0.512155107 | None | None | N |
Y/G | 0.8832 | likely_pathogenic | 0.9116 | pathogenic | -3.375 | Highly Destabilizing | 1.0 | D | 0.813 | deleterious | None | None | None | None | N |
Y/H | 0.6171 | likely_pathogenic | 0.7423 | pathogenic | -1.904 | Destabilizing | 1.0 | D | 0.708 | prob.delet. | D | 0.566885633 | None | None | N |
Y/I | 0.8408 | likely_pathogenic | 0.8974 | pathogenic | -1.612 | Destabilizing | 1.0 | D | 0.795 | deleterious | None | None | None | None | N |
Y/K | 0.969 | likely_pathogenic | 0.983 | pathogenic | -2.303 | Highly Destabilizing | 1.0 | D | 0.789 | deleterious | None | None | None | None | N |
Y/L | 0.827 | likely_pathogenic | 0.8716 | pathogenic | -1.612 | Destabilizing | 0.999 | D | 0.665 | neutral | None | None | None | None | N |
Y/M | 0.8801 | likely_pathogenic | 0.9169 | pathogenic | -1.39 | Destabilizing | 1.0 | D | 0.761 | deleterious | None | None | None | None | N |
Y/N | 0.6639 | likely_pathogenic | 0.7618 | pathogenic | -2.996 | Highly Destabilizing | 1.0 | D | 0.802 | deleterious | D | 0.737121609 | None | None | N |
Y/P | 0.9907 | likely_pathogenic | 0.9936 | pathogenic | -2.07 | Highly Destabilizing | 1.0 | D | 0.829 | deleterious | None | None | None | None | N |
Y/Q | 0.9399 | likely_pathogenic | 0.9695 | pathogenic | -2.764 | Highly Destabilizing | 1.0 | D | 0.81 | deleterious | None | None | None | None | N |
Y/R | 0.9193 | likely_pathogenic | 0.9537 | pathogenic | -1.991 | Destabilizing | 1.0 | D | 0.805 | deleterious | None | None | None | None | N |
Y/S | 0.7927 | likely_pathogenic | 0.852 | pathogenic | -3.421 | Highly Destabilizing | 1.0 | D | 0.789 | deleterious | D | 0.675520067 | None | None | N |
Y/T | 0.8419 | likely_pathogenic | 0.8916 | pathogenic | -3.125 | Highly Destabilizing | 1.0 | D | 0.791 | deleterious | None | None | None | None | N |
Y/V | 0.7299 | likely_pathogenic | 0.8006 | pathogenic | -2.07 | Highly Destabilizing | 1.0 | D | 0.737 | prob.delet. | None | None | None | None | N |
Y/W | 0.6849 | likely_pathogenic | 0.7356 | pathogenic | -0.593 | Destabilizing | 1.0 | D | 0.695 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.