Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14988 | 45187;45188;45189 | chr2:178621960;178621959;178621958 | chr2:179486687;179486686;179486685 |
N2AB | 13347 | 40264;40265;40266 | chr2:178621960;178621959;178621958 | chr2:179486687;179486686;179486685 |
N2A | 12420 | 37483;37484;37485 | chr2:178621960;178621959;178621958 | chr2:179486687;179486686;179486685 |
N2B | 5923 | 17992;17993;17994 | chr2:178621960;178621959;178621958 | chr2:179486687;179486686;179486685 |
Novex-1 | 6048 | 18367;18368;18369 | chr2:178621960;178621959;178621958 | chr2:179486687;179486686;179486685 |
Novex-2 | 6115 | 18568;18569;18570 | chr2:178621960;178621959;178621958 | chr2:179486687;179486686;179486685 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/V | rs1478836616 | None | 0.997 | N | 0.703 | 0.491 | 0.444505407614 | gnomAD-3.1.2 | 1.32E-05 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 2.94E-05 | 0 | 0 |
D/V | rs1478836616 | None | 0.997 | N | 0.703 | 0.491 | 0.444505407614 | gnomAD-4.0.0 | 1.98612E-05 | None | None | None | None | N | None | 0 | 0 | None | 3.38776E-05 | 0 | None | 0 | 0 | 2.63023E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.4461 | ambiguous | 0.5057 | ambiguous | -0.684 | Destabilizing | 0.978 | D | 0.534 | neutral | N | 0.507513484 | None | None | N |
D/C | 0.9318 | likely_pathogenic | 0.941 | pathogenic | -0.265 | Destabilizing | 1.0 | D | 0.687 | prob.neutral | None | None | None | None | N |
D/E | 0.2456 | likely_benign | 0.2698 | benign | -0.673 | Destabilizing | 0.198 | N | 0.205 | neutral | N | 0.382366342 | None | None | N |
D/F | 0.9263 | likely_pathogenic | 0.9325 | pathogenic | -0.377 | Destabilizing | 0.999 | D | 0.709 | prob.delet. | None | None | None | None | N |
D/G | 0.5279 | ambiguous | 0.5912 | pathogenic | -1.031 | Destabilizing | 0.989 | D | 0.505 | neutral | N | 0.484837139 | None | None | N |
D/H | 0.5833 | likely_pathogenic | 0.6247 | pathogenic | -0.687 | Destabilizing | 1.0 | D | 0.621 | neutral | N | 0.488645922 | None | None | N |
D/I | 0.7674 | likely_pathogenic | 0.8042 | pathogenic | 0.234 | Stabilizing | 0.999 | D | 0.715 | prob.delet. | None | None | None | None | N |
D/K | 0.7026 | likely_pathogenic | 0.7637 | pathogenic | -0.292 | Destabilizing | 0.983 | D | 0.479 | neutral | None | None | None | None | N |
D/L | 0.7923 | likely_pathogenic | 0.8305 | pathogenic | 0.234 | Stabilizing | 0.998 | D | 0.71 | prob.delet. | None | None | None | None | N |
D/M | 0.8981 | likely_pathogenic | 0.9189 | pathogenic | 0.679 | Stabilizing | 1.0 | D | 0.683 | prob.neutral | None | None | None | None | N |
D/N | 0.2055 | likely_benign | 0.2323 | benign | -0.728 | Destabilizing | 0.989 | D | 0.471 | neutral | N | 0.49783388 | None | None | N |
D/P | 0.9885 | likely_pathogenic | 0.9911 | pathogenic | -0.048 | Destabilizing | 0.999 | D | 0.625 | neutral | None | None | None | None | N |
D/Q | 0.5721 | likely_pathogenic | 0.6432 | pathogenic | -0.607 | Destabilizing | 0.995 | D | 0.505 | neutral | None | None | None | None | N |
D/R | 0.7163 | likely_pathogenic | 0.7699 | pathogenic | -0.212 | Destabilizing | 0.995 | D | 0.674 | neutral | None | None | None | None | N |
D/S | 0.2886 | likely_benign | 0.3327 | benign | -1.018 | Destabilizing | 0.983 | D | 0.437 | neutral | None | None | None | None | N |
D/T | 0.4836 | ambiguous | 0.5322 | ambiguous | -0.722 | Destabilizing | 0.998 | D | 0.549 | neutral | None | None | None | None | N |
D/V | 0.5791 | likely_pathogenic | 0.6189 | pathogenic | -0.048 | Destabilizing | 0.997 | D | 0.703 | prob.neutral | N | 0.485497335 | None | None | N |
D/W | 0.9814 | likely_pathogenic | 0.9845 | pathogenic | -0.191 | Destabilizing | 1.0 | D | 0.664 | neutral | None | None | None | None | N |
D/Y | 0.6301 | likely_pathogenic | 0.6794 | pathogenic | -0.113 | Destabilizing | 0.999 | D | 0.709 | prob.delet. | D | 0.562759758 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.