Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 1499 | 4720;4721;4722 | chr2:178777570;178777569;178777568 | chr2:179642297;179642296;179642295 |
N2AB | 1499 | 4720;4721;4722 | chr2:178777570;178777569;178777568 | chr2:179642297;179642296;179642295 |
N2A | 1499 | 4720;4721;4722 | chr2:178777570;178777569;178777568 | chr2:179642297;179642296;179642295 |
N2B | 1453 | 4582;4583;4584 | chr2:178777570;178777569;178777568 | chr2:179642297;179642296;179642295 |
Novex-1 | 1453 | 4582;4583;4584 | chr2:178777570;178777569;178777568 | chr2:179642297;179642296;179642295 |
Novex-2 | 1453 | 4582;4583;4584 | chr2:178777570;178777569;178777568 | chr2:179642297;179642296;179642295 |
Novex-3 | 1499 | 4720;4721;4722 | chr2:178777570;178777569;178777568 | chr2:179642297;179642296;179642295 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/S | rs745448931 | 0.038 | 0.905 | N | 0.292 | 0.19 | 0.208816687407 | gnomAD-2.1.1 | 3.99E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 0 | 0 |
N/S | rs745448931 | 0.038 | 0.905 | N | 0.292 | 0.19 | 0.208816687407 | gnomAD-4.0.0 | 2.0525E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.79871E-06 | 1.1595E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.5084 | ambiguous | 0.5706 | pathogenic | -0.34 | Destabilizing | 0.994 | D | 0.489 | neutral | None | None | None | None | N |
N/C | 0.6679 | likely_pathogenic | 0.7052 | pathogenic | 0.37 | Stabilizing | 1.0 | D | 0.657 | neutral | None | None | None | None | N |
N/D | 0.3269 | likely_benign | 0.3828 | ambiguous | 0.081 | Stabilizing | 0.996 | D | 0.423 | neutral | N | 0.482123626 | None | None | N |
N/E | 0.7429 | likely_pathogenic | 0.7916 | pathogenic | 0.061 | Stabilizing | 0.997 | D | 0.475 | neutral | None | None | None | None | N |
N/F | 0.9217 | likely_pathogenic | 0.9376 | pathogenic | -0.616 | Destabilizing | 1.0 | D | 0.679 | prob.neutral | None | None | None | None | N |
N/G | 0.5071 | ambiguous | 0.5598 | ambiguous | -0.542 | Destabilizing | 0.997 | D | 0.412 | neutral | None | None | None | None | N |
N/H | 0.3013 | likely_benign | 0.3336 | benign | -0.593 | Destabilizing | 1.0 | D | 0.572 | neutral | N | 0.509008629 | None | None | N |
N/I | 0.7287 | likely_pathogenic | 0.7877 | pathogenic | 0.11 | Stabilizing | 0.999 | D | 0.697 | prob.neutral | N | 0.511834002 | None | None | N |
N/K | 0.8093 | likely_pathogenic | 0.8526 | pathogenic | 0.011 | Stabilizing | 0.996 | D | 0.479 | neutral | N | 0.507699608 | None | None | N |
N/L | 0.6125 | likely_pathogenic | 0.664 | pathogenic | 0.11 | Stabilizing | 1.0 | D | 0.664 | neutral | None | None | None | None | N |
N/M | 0.7353 | likely_pathogenic | 0.7784 | pathogenic | 0.446 | Stabilizing | 1.0 | D | 0.607 | neutral | None | None | None | None | N |
N/P | 0.6478 | likely_pathogenic | 0.6811 | pathogenic | -0.012 | Destabilizing | 1.0 | D | 0.635 | neutral | None | None | None | None | N |
N/Q | 0.7047 | likely_pathogenic | 0.7445 | pathogenic | -0.41 | Destabilizing | 1.0 | D | 0.575 | neutral | None | None | None | None | N |
N/R | 0.8024 | likely_pathogenic | 0.8376 | pathogenic | 0.016 | Stabilizing | 1.0 | D | 0.581 | neutral | None | None | None | None | N |
N/S | 0.1075 | likely_benign | 0.1196 | benign | -0.209 | Destabilizing | 0.905 | D | 0.292 | neutral | N | 0.44281406 | None | None | N |
N/T | 0.325 | likely_benign | 0.3785 | ambiguous | -0.08 | Destabilizing | 0.992 | D | 0.456 | neutral | N | 0.500389753 | None | None | N |
N/V | 0.7172 | likely_pathogenic | 0.7664 | pathogenic | -0.012 | Destabilizing | 1.0 | D | 0.693 | prob.neutral | None | None | None | None | N |
N/W | 0.9584 | likely_pathogenic | 0.9652 | pathogenic | -0.587 | Destabilizing | 1.0 | D | 0.687 | prob.neutral | None | None | None | None | N |
N/Y | 0.5365 | ambiguous | 0.5862 | pathogenic | -0.334 | Destabilizing | 1.0 | D | 0.639 | neutral | D | 0.550364197 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.