Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14997 | 45214;45215;45216 | chr2:178621933;178621932;178621931 | chr2:179486660;179486659;179486658 |
N2AB | 13356 | 40291;40292;40293 | chr2:178621933;178621932;178621931 | chr2:179486660;179486659;179486658 |
N2A | 12429 | 37510;37511;37512 | chr2:178621933;178621932;178621931 | chr2:179486660;179486659;179486658 |
N2B | 5932 | 18019;18020;18021 | chr2:178621933;178621932;178621931 | chr2:179486660;179486659;179486658 |
Novex-1 | 6057 | 18394;18395;18396 | chr2:178621933;178621932;178621931 | chr2:179486660;179486659;179486658 |
Novex-2 | 6124 | 18595;18596;18597 | chr2:178621933;178621932;178621931 | chr2:179486660;179486659;179486658 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/V | rs1437722307 | -1.601 | 0.4 | N | 0.265 | 0.076 | 0.575180444326 | gnomAD-2.1.1 | 4.04E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.28E-05 | None | 0 | 0 | 0 |
I/V | rs1437722307 | -1.601 | 0.4 | N | 0.265 | 0.076 | 0.575180444326 | gnomAD-4.0.0 | 1.59532E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43451E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.8391 | likely_pathogenic | 0.7787 | pathogenic | -2.924 | Highly Destabilizing | 0.985 | D | 0.642 | neutral | None | None | None | None | N |
I/C | 0.9089 | likely_pathogenic | 0.8765 | pathogenic | -2.04 | Highly Destabilizing | 1.0 | D | 0.715 | prob.delet. | None | None | None | None | N |
I/D | 0.9694 | likely_pathogenic | 0.9479 | pathogenic | -3.562 | Highly Destabilizing | 0.999 | D | 0.793 | deleterious | None | None | None | None | N |
I/E | 0.8738 | likely_pathogenic | 0.8291 | pathogenic | -3.305 | Highly Destabilizing | 0.999 | D | 0.768 | deleterious | None | None | None | None | N |
I/F | 0.401 | ambiguous | 0.3343 | benign | -1.734 | Destabilizing | 0.994 | D | 0.64 | neutral | N | 0.508038287 | None | None | N |
I/G | 0.9525 | likely_pathogenic | 0.9296 | pathogenic | -3.449 | Highly Destabilizing | 0.999 | D | 0.766 | deleterious | None | None | None | None | N |
I/H | 0.8601 | likely_pathogenic | 0.8066 | pathogenic | -2.993 | Highly Destabilizing | 1.0 | D | 0.784 | deleterious | None | None | None | None | N |
I/K | 0.8445 | likely_pathogenic | 0.7865 | pathogenic | -2.338 | Highly Destabilizing | 0.999 | D | 0.769 | deleterious | None | None | None | None | N |
I/L | 0.3282 | likely_benign | 0.2817 | benign | -1.36 | Destabilizing | 0.061 | N | 0.293 | neutral | N | 0.508808225 | None | None | N |
I/M | 0.2293 | likely_benign | 0.2022 | benign | -1.36 | Destabilizing | 0.994 | D | 0.661 | neutral | N | 0.508055853 | None | None | N |
I/N | 0.7198 | likely_pathogenic | 0.6501 | pathogenic | -2.809 | Highly Destabilizing | 0.999 | D | 0.799 | deleterious | N | 0.508176558 | None | None | N |
I/P | 0.9964 | likely_pathogenic | 0.9926 | pathogenic | -1.871 | Destabilizing | 0.999 | D | 0.793 | deleterious | None | None | None | None | N |
I/Q | 0.8233 | likely_pathogenic | 0.7704 | pathogenic | -2.603 | Highly Destabilizing | 0.999 | D | 0.798 | deleterious | None | None | None | None | N |
I/R | 0.8034 | likely_pathogenic | 0.7288 | pathogenic | -2.07 | Highly Destabilizing | 0.999 | D | 0.801 | deleterious | None | None | None | None | N |
I/S | 0.7171 | likely_pathogenic | 0.6493 | pathogenic | -3.373 | Highly Destabilizing | 0.997 | D | 0.704 | prob.neutral | N | 0.459921882 | None | None | N |
I/T | 0.6663 | likely_pathogenic | 0.5975 | pathogenic | -2.99 | Highly Destabilizing | 0.98 | D | 0.689 | prob.neutral | N | 0.465527789 | None | None | N |
I/V | 0.1785 | likely_benign | 0.1614 | benign | -1.871 | Destabilizing | 0.4 | N | 0.265 | neutral | N | 0.485558266 | None | None | N |
I/W | 0.9226 | likely_pathogenic | 0.8962 | pathogenic | -2.212 | Highly Destabilizing | 1.0 | D | 0.755 | deleterious | None | None | None | None | N |
I/Y | 0.6958 | likely_pathogenic | 0.6421 | pathogenic | -2.001 | Highly Destabilizing | 0.999 | D | 0.746 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.