Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 14999 | 45220;45221;45222 | chr2:178621927;178621926;178621925 | chr2:179486654;179486653;179486652 |
N2AB | 13358 | 40297;40298;40299 | chr2:178621927;178621926;178621925 | chr2:179486654;179486653;179486652 |
N2A | 12431 | 37516;37517;37518 | chr2:178621927;178621926;178621925 | chr2:179486654;179486653;179486652 |
N2B | 5934 | 18025;18026;18027 | chr2:178621927;178621926;178621925 | chr2:179486654;179486653;179486652 |
Novex-1 | 6059 | 18400;18401;18402 | chr2:178621927;178621926;178621925 | chr2:179486654;179486653;179486652 |
Novex-2 | 6126 | 18601;18602;18603 | chr2:178621927;178621926;178621925 | chr2:179486654;179486653;179486652 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/I | rs1382155901 | -0.494 | 0.37 | N | 0.235 | 0.108 | 0.516770950016 | gnomAD-2.1.1 | 4.04E-06 | None | None | None | None | N | None | 0 | 2.92E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
V/I | rs1382155901 | -0.494 | 0.37 | N | 0.235 | 0.108 | 0.516770950016 | gnomAD-4.0.0 | 3.19049E-06 | None | None | None | None | N | None | 0 | 4.59031E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.5157 | ambiguous | 0.5454 | ambiguous | -2.204 | Highly Destabilizing | 0.978 | D | 0.445 | neutral | D | 0.575633039 | None | None | N |
V/C | 0.8988 | likely_pathogenic | 0.9076 | pathogenic | -1.749 | Destabilizing | 1.0 | D | 0.765 | deleterious | None | None | None | None | N |
V/D | 0.8391 | likely_pathogenic | 0.8428 | pathogenic | -2.833 | Highly Destabilizing | 0.999 | D | 0.798 | deleterious | D | 0.577890796 | None | None | N |
V/E | 0.6173 | likely_pathogenic | 0.6319 | pathogenic | -2.693 | Highly Destabilizing | 0.999 | D | 0.747 | deleterious | None | None | None | None | N |
V/F | 0.3893 | ambiguous | 0.3714 | ambiguous | -1.382 | Destabilizing | 0.997 | D | 0.773 | deleterious | N | 0.502895438 | None | None | N |
V/G | 0.6375 | likely_pathogenic | 0.6618 | pathogenic | -2.665 | Highly Destabilizing | 0.999 | D | 0.778 | deleterious | D | 0.659513718 | None | None | N |
V/H | 0.8057 | likely_pathogenic | 0.8261 | pathogenic | -2.313 | Highly Destabilizing | 1.0 | D | 0.789 | deleterious | None | None | None | None | N |
V/I | 0.0954 | likely_benign | 0.0953 | benign | -0.946 | Destabilizing | 0.37 | N | 0.235 | neutral | N | 0.441035801 | None | None | N |
V/K | 0.6769 | likely_pathogenic | 0.7007 | pathogenic | -1.976 | Destabilizing | 0.999 | D | 0.755 | deleterious | None | None | None | None | N |
V/L | 0.299 | likely_benign | 0.3078 | benign | -0.946 | Destabilizing | 0.9 | D | 0.381 | neutral | N | 0.510168819 | None | None | N |
V/M | 0.3057 | likely_benign | 0.3074 | benign | -0.894 | Destabilizing | 0.998 | D | 0.687 | prob.neutral | None | None | None | None | N |
V/N | 0.6579 | likely_pathogenic | 0.7031 | pathogenic | -2.103 | Highly Destabilizing | 0.999 | D | 0.796 | deleterious | None | None | None | None | N |
V/P | 0.99 | likely_pathogenic | 0.9882 | pathogenic | -1.337 | Destabilizing | 0.999 | D | 0.772 | deleterious | None | None | None | None | N |
V/Q | 0.6012 | likely_pathogenic | 0.6303 | pathogenic | -2.082 | Highly Destabilizing | 0.999 | D | 0.776 | deleterious | None | None | None | None | N |
V/R | 0.6144 | likely_pathogenic | 0.6305 | pathogenic | -1.578 | Destabilizing | 0.999 | D | 0.797 | deleterious | None | None | None | None | N |
V/S | 0.5762 | likely_pathogenic | 0.6282 | pathogenic | -2.663 | Highly Destabilizing | 0.999 | D | 0.754 | deleterious | None | None | None | None | N |
V/T | 0.4602 | ambiguous | 0.4916 | ambiguous | -2.405 | Highly Destabilizing | 0.992 | D | 0.535 | neutral | None | None | None | None | N |
V/W | 0.9418 | likely_pathogenic | 0.9415 | pathogenic | -1.842 | Destabilizing | 1.0 | D | 0.764 | deleterious | None | None | None | None | N |
V/Y | 0.7596 | likely_pathogenic | 0.769 | pathogenic | -1.542 | Destabilizing | 0.999 | D | 0.779 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.