Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 1503 | 4732;4733;4734 | chr2:178777558;178777557;178777556 | chr2:179642285;179642284;179642283 |
N2AB | 1503 | 4732;4733;4734 | chr2:178777558;178777557;178777556 | chr2:179642285;179642284;179642283 |
N2A | 1503 | 4732;4733;4734 | chr2:178777558;178777557;178777556 | chr2:179642285;179642284;179642283 |
N2B | 1457 | 4594;4595;4596 | chr2:178777558;178777557;178777556 | chr2:179642285;179642284;179642283 |
Novex-1 | 1457 | 4594;4595;4596 | chr2:178777558;178777557;178777556 | chr2:179642285;179642284;179642283 |
Novex-2 | 1457 | 4594;4595;4596 | chr2:178777558;178777557;178777556 | chr2:179642285;179642284;179642283 |
Novex-3 | 1503 | 4732;4733;4734 | chr2:178777558;178777557;178777556 | chr2:179642285;179642284;179642283 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/R | None | None | 1.0 | N | 0.653 | 0.714 | 0.468085328875 | gnomAD-4.0.0 | 2.05249E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.79871E-06 | 1.15939E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/A | 0.9649 | likely_pathogenic | 0.9786 | pathogenic | -1.514 | Destabilizing | 0.999 | D | 0.603 | neutral | None | None | None | None | N |
H/C | 0.5953 | likely_pathogenic | 0.685 | pathogenic | -1.018 | Destabilizing | 1.0 | D | 0.807 | deleterious | None | None | None | None | N |
H/D | 0.9537 | likely_pathogenic | 0.9725 | pathogenic | -1.297 | Destabilizing | 1.0 | D | 0.695 | prob.neutral | D | 0.582194354 | None | None | N |
H/E | 0.9356 | likely_pathogenic | 0.9623 | pathogenic | -1.131 | Destabilizing | 0.999 | D | 0.467 | neutral | None | None | None | None | N |
H/F | 0.9024 | likely_pathogenic | 0.9386 | pathogenic | -0.021 | Destabilizing | 1.0 | D | 0.774 | deleterious | None | None | None | None | N |
H/G | 0.955 | likely_pathogenic | 0.9726 | pathogenic | -1.941 | Destabilizing | 0.999 | D | 0.647 | neutral | None | None | None | None | N |
H/I | 0.9711 | likely_pathogenic | 0.9834 | pathogenic | -0.28 | Destabilizing | 1.0 | D | 0.821 | deleterious | None | None | None | None | N |
H/K | 0.7712 | likely_pathogenic | 0.8362 | pathogenic | -1.172 | Destabilizing | 1.0 | D | 0.693 | prob.neutral | None | None | None | None | N |
H/L | 0.7961 | likely_pathogenic | 0.8423 | pathogenic | -0.28 | Destabilizing | 1.0 | D | 0.781 | deleterious | D | 0.542898411 | None | None | N |
H/M | 0.9719 | likely_pathogenic | 0.9817 | pathogenic | -0.555 | Destabilizing | 1.0 | D | 0.791 | deleterious | None | None | None | None | N |
H/N | 0.6671 | likely_pathogenic | 0.7654 | pathogenic | -1.592 | Destabilizing | 0.999 | D | 0.477 | neutral | D | 0.601802526 | None | None | N |
H/P | 0.9753 | likely_pathogenic | 0.9808 | pathogenic | -0.676 | Destabilizing | 1.0 | D | 0.796 | deleterious | N | 0.507166245 | None | None | N |
H/Q | 0.7563 | likely_pathogenic | 0.8414 | pathogenic | -1.214 | Destabilizing | 1.0 | D | 0.702 | prob.neutral | D | 0.58783913 | None | None | N |
H/R | 0.3763 | ambiguous | 0.4766 | ambiguous | -1.513 | Destabilizing | 1.0 | D | 0.653 | neutral | N | 0.506562894 | None | None | N |
H/S | 0.9013 | likely_pathogenic | 0.9399 | pathogenic | -1.757 | Destabilizing | 1.0 | D | 0.689 | prob.neutral | None | None | None | None | N |
H/T | 0.9507 | likely_pathogenic | 0.9721 | pathogenic | -1.465 | Destabilizing | 1.0 | D | 0.77 | deleterious | None | None | None | None | N |
H/V | 0.9449 | likely_pathogenic | 0.9663 | pathogenic | -0.676 | Destabilizing | 1.0 | D | 0.808 | deleterious | None | None | None | None | N |
H/W | 0.8209 | likely_pathogenic | 0.8677 | pathogenic | 0.422 | Stabilizing | 1.0 | D | 0.789 | deleterious | None | None | None | None | N |
H/Y | 0.4412 | ambiguous | 0.5547 | ambiguous | 0.402 | Stabilizing | 0.999 | D | 0.515 | neutral | N | 0.502268666 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.