Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15035 | 45328;45329;45330 | chr2:178621721;178621720;178621719 | chr2:179486448;179486447;179486446 |
N2AB | 13394 | 40405;40406;40407 | chr2:178621721;178621720;178621719 | chr2:179486448;179486447;179486446 |
N2A | 12467 | 37624;37625;37626 | chr2:178621721;178621720;178621719 | chr2:179486448;179486447;179486446 |
N2B | 5970 | 18133;18134;18135 | chr2:178621721;178621720;178621719 | chr2:179486448;179486447;179486446 |
Novex-1 | 6095 | 18508;18509;18510 | chr2:178621721;178621720;178621719 | chr2:179486448;179486447;179486446 |
Novex-2 | 6162 | 18709;18710;18711 | chr2:178621721;178621720;178621719 | chr2:179486448;179486447;179486446 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/R | None | None | 0.999 | N | 0.543 | 0.301 | 0.444102476654 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.598 | likely_pathogenic | 0.683 | pathogenic | -0.169 | Destabilizing | 0.999 | D | 0.687 | prob.neutral | None | None | None | None | N |
K/C | 0.907 | likely_pathogenic | 0.9341 | pathogenic | -0.178 | Destabilizing | 1.0 | D | 0.736 | prob.delet. | None | None | None | None | N |
K/D | 0.8233 | likely_pathogenic | 0.8708 | pathogenic | 0.047 | Stabilizing | 1.0 | D | 0.785 | deleterious | None | None | None | None | N |
K/E | 0.3377 | likely_benign | 0.3672 | ambiguous | 0.075 | Stabilizing | 0.999 | D | 0.587 | neutral | N | 0.511665423 | None | None | N |
K/F | 0.9614 | likely_pathogenic | 0.9714 | pathogenic | -0.225 | Destabilizing | 1.0 | D | 0.762 | deleterious | None | None | None | None | N |
K/G | 0.6251 | likely_pathogenic | 0.7072 | pathogenic | -0.43 | Destabilizing | 1.0 | D | 0.732 | prob.delet. | None | None | None | None | N |
K/H | 0.5258 | ambiguous | 0.6054 | pathogenic | -0.784 | Destabilizing | 1.0 | D | 0.699 | prob.neutral | None | None | None | None | N |
K/I | 0.7892 | likely_pathogenic | 0.8233 | pathogenic | 0.456 | Stabilizing | 1.0 | D | 0.789 | deleterious | D | 0.586286171 | None | None | N |
K/L | 0.7482 | likely_pathogenic | 0.7926 | pathogenic | 0.456 | Stabilizing | 1.0 | D | 0.732 | prob.delet. | None | None | None | None | N |
K/M | 0.6332 | likely_pathogenic | 0.6696 | pathogenic | 0.387 | Stabilizing | 1.0 | D | 0.689 | prob.neutral | None | None | None | None | N |
K/N | 0.6908 | likely_pathogenic | 0.7427 | pathogenic | 0.144 | Stabilizing | 1.0 | D | 0.7 | prob.neutral | D | 0.66233487 | None | None | N |
K/P | 0.9686 | likely_pathogenic | 0.9731 | pathogenic | 0.277 | Stabilizing | 1.0 | D | 0.77 | deleterious | None | None | None | None | N |
K/Q | 0.2373 | likely_benign | 0.2615 | benign | -0.063 | Destabilizing | 1.0 | D | 0.675 | neutral | N | 0.504808992 | None | None | N |
K/R | 0.0894 | likely_benign | 0.0917 | benign | -0.141 | Destabilizing | 0.999 | D | 0.543 | neutral | N | 0.505608003 | None | None | N |
K/S | 0.6452 | likely_pathogenic | 0.719 | pathogenic | -0.426 | Destabilizing | 0.999 | D | 0.636 | neutral | None | None | None | None | N |
K/T | 0.4358 | ambiguous | 0.4933 | ambiguous | -0.229 | Destabilizing | 1.0 | D | 0.76 | deleterious | D | 0.54097095 | None | None | N |
K/V | 0.683 | likely_pathogenic | 0.7409 | pathogenic | 0.277 | Stabilizing | 1.0 | D | 0.78 | deleterious | None | None | None | None | N |
K/W | 0.9245 | likely_pathogenic | 0.9384 | pathogenic | -0.153 | Destabilizing | 1.0 | D | 0.74 | deleterious | None | None | None | None | N |
K/Y | 0.8948 | likely_pathogenic | 0.9164 | pathogenic | 0.174 | Stabilizing | 1.0 | D | 0.749 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.