Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15041 | 45346;45347;45348 | chr2:178621703;178621702;178621701 | chr2:179486430;179486429;179486428 |
N2AB | 13400 | 40423;40424;40425 | chr2:178621703;178621702;178621701 | chr2:179486430;179486429;179486428 |
N2A | 12473 | 37642;37643;37644 | chr2:178621703;178621702;178621701 | chr2:179486430;179486429;179486428 |
N2B | 5976 | 18151;18152;18153 | chr2:178621703;178621702;178621701 | chr2:179486430;179486429;179486428 |
Novex-1 | 6101 | 18526;18527;18528 | chr2:178621703;178621702;178621701 | chr2:179486430;179486429;179486428 |
Novex-2 | 6168 | 18727;18728;18729 | chr2:178621703;178621702;178621701 | chr2:179486430;179486429;179486428 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/G | None | None | 0.946 | D | 0.645 | 0.53 | 0.476676017676 | gnomAD-4.0.0 | 2.40064E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.625E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1936 | likely_benign | 0.2524 | benign | -0.59 | Destabilizing | 0.834 | D | 0.648 | neutral | D | 0.543296112 | None | None | N |
E/C | 0.9194 | likely_pathogenic | 0.9602 | pathogenic | -0.367 | Destabilizing | 0.998 | D | 0.742 | deleterious | None | None | None | None | N |
E/D | 0.1392 | likely_benign | 0.2508 | benign | -0.613 | Destabilizing | 0.016 | N | 0.271 | neutral | D | 0.595027038 | None | None | N |
E/F | 0.8355 | likely_pathogenic | 0.9214 | pathogenic | -0.263 | Destabilizing | 0.998 | D | 0.701 | prob.neutral | None | None | None | None | N |
E/G | 0.2714 | likely_benign | 0.4177 | ambiguous | -0.848 | Destabilizing | 0.946 | D | 0.645 | neutral | D | 0.631822754 | None | None | N |
E/H | 0.5568 | ambiguous | 0.7434 | pathogenic | -0.167 | Destabilizing | 0.998 | D | 0.719 | prob.delet. | None | None | None | None | N |
E/I | 0.4649 | ambiguous | 0.572 | pathogenic | 0.079 | Stabilizing | 0.979 | D | 0.726 | prob.delet. | None | None | None | None | N |
E/K | 0.2345 | likely_benign | 0.3568 | ambiguous | -0.255 | Destabilizing | 0.834 | D | 0.615 | neutral | N | 0.510439237 | None | None | N |
E/L | 0.5453 | ambiguous | 0.6836 | pathogenic | 0.079 | Stabilizing | 0.979 | D | 0.709 | prob.delet. | None | None | None | None | N |
E/M | 0.5738 | likely_pathogenic | 0.6562 | pathogenic | 0.18 | Stabilizing | 0.998 | D | 0.686 | prob.neutral | None | None | None | None | N |
E/N | 0.2959 | likely_benign | 0.4841 | ambiguous | -0.56 | Destabilizing | 0.921 | D | 0.744 | deleterious | None | None | None | None | N |
E/P | 0.7621 | likely_pathogenic | 0.9092 | pathogenic | -0.123 | Destabilizing | 0.979 | D | 0.742 | deleterious | None | None | None | None | N |
E/Q | 0.1957 | likely_benign | 0.2657 | benign | -0.49 | Destabilizing | 0.946 | D | 0.699 | prob.neutral | N | 0.516250163 | None | None | N |
E/R | 0.3572 | ambiguous | 0.5433 | ambiguous | 0.087 | Stabilizing | 0.959 | D | 0.763 | deleterious | None | None | None | None | N |
E/S | 0.2144 | likely_benign | 0.3232 | benign | -0.774 | Destabilizing | 0.769 | D | 0.636 | neutral | None | None | None | None | N |
E/T | 0.232 | likely_benign | 0.2983 | benign | -0.573 | Destabilizing | 0.959 | D | 0.716 | prob.delet. | None | None | None | None | N |
E/V | 0.2715 | likely_benign | 0.3384 | benign | -0.123 | Destabilizing | 0.973 | D | 0.694 | prob.neutral | N | 0.502467075 | None | None | N |
E/W | 0.9403 | likely_pathogenic | 0.9782 | pathogenic | -0.067 | Destabilizing | 0.998 | D | 0.749 | deleterious | None | None | None | None | N |
E/Y | 0.7515 | likely_pathogenic | 0.8855 | pathogenic | -0.036 | Destabilizing | 0.998 | D | 0.692 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.