Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15042 | 45349;45350;45351 | chr2:178621700;178621699;178621698 | chr2:179486427;179486426;179486425 |
N2AB | 13401 | 40426;40427;40428 | chr2:178621700;178621699;178621698 | chr2:179486427;179486426;179486425 |
N2A | 12474 | 37645;37646;37647 | chr2:178621700;178621699;178621698 | chr2:179486427;179486426;179486425 |
N2B | 5977 | 18154;18155;18156 | chr2:178621700;178621699;178621698 | chr2:179486427;179486426;179486425 |
Novex-1 | 6102 | 18529;18530;18531 | chr2:178621700;178621699;178621698 | chr2:179486427;179486426;179486425 |
Novex-2 | 6169 | 18730;18731;18732 | chr2:178621700;178621699;178621698 | chr2:179486427;179486426;179486425 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/I | None | None | 0.324 | N | 0.439 | 0.26 | 0.625329643188 | gnomAD-4.0.0 | 1.20033E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.31251E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.2007 | likely_benign | 0.243 | benign | -1.885 | Destabilizing | None | N | 0.135 | neutral | N | 0.466112578 | None | None | N |
V/C | 0.8486 | likely_pathogenic | 0.8994 | pathogenic | -1.314 | Destabilizing | 0.944 | D | 0.534 | neutral | None | None | None | None | N |
V/D | 0.7157 | likely_pathogenic | 0.7887 | pathogenic | -2.112 | Highly Destabilizing | 0.773 | D | 0.605 | neutral | D | 0.748399274 | None | None | N |
V/E | 0.6697 | likely_pathogenic | 0.7475 | pathogenic | -2.062 | Highly Destabilizing | 0.388 | N | 0.533 | neutral | None | None | None | None | N |
V/F | 0.3794 | ambiguous | 0.4356 | ambiguous | -1.408 | Destabilizing | 0.773 | D | 0.581 | neutral | D | 0.613706367 | None | None | N |
V/G | 0.2202 | likely_benign | 0.284 | benign | -2.271 | Highly Destabilizing | None | N | 0.292 | neutral | D | 0.528894982 | None | None | N |
V/H | 0.8798 | likely_pathogenic | 0.9263 | pathogenic | -1.889 | Destabilizing | 0.981 | D | 0.556 | neutral | None | None | None | None | N |
V/I | 0.1185 | likely_benign | 0.1224 | benign | -0.886 | Destabilizing | 0.324 | N | 0.439 | neutral | N | 0.52179422 | None | None | N |
V/K | 0.6685 | likely_pathogenic | 0.7913 | pathogenic | -1.602 | Destabilizing | 0.388 | N | 0.533 | neutral | None | None | None | None | N |
V/L | 0.4295 | ambiguous | 0.5087 | ambiguous | -0.886 | Destabilizing | 0.09 | N | 0.422 | neutral | D | 0.59051797 | None | None | N |
V/M | 0.3039 | likely_benign | 0.3337 | benign | -0.657 | Destabilizing | 0.818 | D | 0.523 | neutral | None | None | None | None | N |
V/N | 0.5755 | likely_pathogenic | 0.6704 | pathogenic | -1.484 | Destabilizing | 0.818 | D | 0.603 | neutral | None | None | None | None | N |
V/P | 0.9439 | likely_pathogenic | 0.9719 | pathogenic | -1.187 | Destabilizing | 0.818 | D | 0.575 | neutral | None | None | None | None | N |
V/Q | 0.6947 | likely_pathogenic | 0.7877 | pathogenic | -1.605 | Destabilizing | 0.818 | D | 0.565 | neutral | None | None | None | None | N |
V/R | 0.6576 | likely_pathogenic | 0.7803 | pathogenic | -1.107 | Destabilizing | 0.69 | D | 0.593 | neutral | None | None | None | None | N |
V/S | 0.3696 | ambiguous | 0.4462 | ambiguous | -2.022 | Highly Destabilizing | 0.116 | N | 0.443 | neutral | None | None | None | None | N |
V/T | 0.2519 | likely_benign | 0.3 | benign | -1.861 | Destabilizing | 0.388 | N | 0.397 | neutral | None | None | None | None | N |
V/W | 0.9619 | likely_pathogenic | 0.9773 | pathogenic | -1.71 | Destabilizing | 0.981 | D | 0.559 | neutral | None | None | None | None | N |
V/Y | 0.8277 | likely_pathogenic | 0.8746 | pathogenic | -1.417 | Destabilizing | 0.932 | D | 0.585 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.