Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15073 | 45442;45443;45444 | chr2:178621607;178621606;178621605 | chr2:179486334;179486333;179486332 |
N2AB | 13432 | 40519;40520;40521 | chr2:178621607;178621606;178621605 | chr2:179486334;179486333;179486332 |
N2A | 12505 | 37738;37739;37740 | chr2:178621607;178621606;178621605 | chr2:179486334;179486333;179486332 |
N2B | 6008 | 18247;18248;18249 | chr2:178621607;178621606;178621605 | chr2:179486334;179486333;179486332 |
Novex-1 | 6133 | 18622;18623;18624 | chr2:178621607;178621606;178621605 | chr2:179486334;179486333;179486332 |
Novex-2 | 6200 | 18823;18824;18825 | chr2:178621607;178621606;178621605 | chr2:179486334;179486333;179486332 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | rs1444196912 | -0.466 | 0.139 | N | 0.223 | 0.161 | 0.26547132957 | gnomAD-2.1.1 | 4.04E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.95E-06 | 0 |
T/A | rs1444196912 | -0.466 | 0.139 | N | 0.223 | 0.161 | 0.26547132957 | gnomAD-4.0.0 | 4.79256E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.39944E-06 | 0 | 1.65837E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.101 | likely_benign | 0.1014 | benign | -0.434 | Destabilizing | 0.139 | N | 0.223 | neutral | N | 0.487637419 | None | None | N |
T/C | 0.586 | likely_pathogenic | 0.6688 | pathogenic | -0.41 | Destabilizing | 0.995 | D | 0.329 | neutral | None | None | None | None | N |
T/D | 0.2868 | likely_benign | 0.2658 | benign | 0.428 | Stabilizing | 0.828 | D | 0.349 | neutral | None | None | None | None | N |
T/E | 0.3042 | likely_benign | 0.2739 | benign | 0.396 | Stabilizing | 0.828 | D | 0.345 | neutral | None | None | None | None | N |
T/F | 0.4202 | ambiguous | 0.384 | ambiguous | -0.842 | Destabilizing | 0.944 | D | 0.447 | neutral | None | None | None | None | N |
T/G | 0.1809 | likely_benign | 0.2103 | benign | -0.604 | Destabilizing | 0.001 | N | 0.163 | neutral | None | None | None | None | N |
T/H | 0.313 | likely_benign | 0.3056 | benign | -0.77 | Destabilizing | 0.981 | D | 0.372 | neutral | None | None | None | None | N |
T/I | 0.431 | ambiguous | 0.3724 | ambiguous | -0.098 | Destabilizing | 0.27 | N | 0.333 | neutral | N | 0.513755328 | None | None | N |
T/K | 0.222 | likely_benign | 0.2076 | benign | -0.296 | Destabilizing | 0.784 | D | 0.347 | neutral | N | 0.489024484 | None | None | N |
T/L | 0.2002 | likely_benign | 0.1969 | benign | -0.098 | Destabilizing | 0.329 | N | 0.332 | neutral | None | None | None | None | N |
T/M | 0.1369 | likely_benign | 0.128 | benign | -0.167 | Destabilizing | 0.944 | D | 0.339 | neutral | None | None | None | None | N |
T/N | 0.091 | likely_benign | 0.0948 | benign | -0.256 | Destabilizing | 0.704 | D | 0.223 | neutral | None | None | None | None | N |
T/P | 0.2659 | likely_benign | 0.2531 | benign | -0.18 | Destabilizing | 0.917 | D | 0.419 | neutral | N | 0.509901372 | None | None | N |
T/Q | 0.2605 | likely_benign | 0.2548 | benign | -0.352 | Destabilizing | 0.981 | D | 0.403 | neutral | None | None | None | None | N |
T/R | 0.1991 | likely_benign | 0.1786 | benign | -0.09 | Destabilizing | 0.927 | D | 0.417 | neutral | N | 0.483203616 | None | None | N |
T/S | 0.1003 | likely_benign | 0.1045 | benign | -0.509 | Destabilizing | 0.425 | N | 0.315 | neutral | N | 0.384206862 | None | None | N |
T/V | 0.3245 | likely_benign | 0.3085 | benign | -0.18 | Destabilizing | 0.013 | N | 0.147 | neutral | None | None | None | None | N |
T/W | 0.6944 | likely_pathogenic | 0.7011 | pathogenic | -0.874 | Destabilizing | 0.995 | D | 0.37 | neutral | None | None | None | None | N |
T/Y | 0.3796 | ambiguous | 0.392 | ambiguous | -0.567 | Destabilizing | 0.981 | D | 0.418 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.