Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15076 | 45451;45452;45453 | chr2:178621598;178621597;178621596 | chr2:179486325;179486324;179486323 |
N2AB | 13435 | 40528;40529;40530 | chr2:178621598;178621597;178621596 | chr2:179486325;179486324;179486323 |
N2A | 12508 | 37747;37748;37749 | chr2:178621598;178621597;178621596 | chr2:179486325;179486324;179486323 |
N2B | 6011 | 18256;18257;18258 | chr2:178621598;178621597;178621596 | chr2:179486325;179486324;179486323 |
Novex-1 | 6136 | 18631;18632;18633 | chr2:178621598;178621597;178621596 | chr2:179486325;179486324;179486323 |
Novex-2 | 6203 | 18832;18833;18834 | chr2:178621598;178621597;178621596 | chr2:179486325;179486324;179486323 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/H | None | None | 0.916 | N | 0.621 | 0.425 | 0.443797312901 | gnomAD-4.0.0 | 1.36932E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.79984E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/A | 0.7861 | likely_pathogenic | 0.6825 | pathogenic | -2.91 | Highly Destabilizing | 0.399 | N | 0.618 | neutral | None | None | None | None | N |
Y/C | 0.2108 | likely_benign | 0.1669 | benign | -1.82 | Destabilizing | 0.976 | D | 0.719 | prob.delet. | D | 0.697559508 | None | None | N |
Y/D | 0.7471 | likely_pathogenic | 0.5715 | pathogenic | -2.6 | Highly Destabilizing | 0.916 | D | 0.771 | deleterious | D | 0.698014229 | None | None | N |
Y/E | 0.8689 | likely_pathogenic | 0.7654 | pathogenic | -2.427 | Highly Destabilizing | 0.826 | D | 0.723 | prob.delet. | None | None | None | None | N |
Y/F | 0.1351 | likely_benign | 0.0858 | benign | -1.072 | Destabilizing | 0.002 | N | 0.227 | neutral | N | 0.501725664 | None | None | N |
Y/G | 0.7109 | likely_pathogenic | 0.6426 | pathogenic | -3.32 | Highly Destabilizing | 0.826 | D | 0.75 | deleterious | None | None | None | None | N |
Y/H | 0.3528 | ambiguous | 0.2432 | benign | -1.793 | Destabilizing | 0.916 | D | 0.621 | neutral | N | 0.514569717 | None | None | N |
Y/I | 0.6498 | likely_pathogenic | 0.4935 | ambiguous | -1.584 | Destabilizing | 0.539 | D | 0.674 | neutral | None | None | None | None | N |
Y/K | 0.7919 | likely_pathogenic | 0.6998 | pathogenic | -2.126 | Highly Destabilizing | 0.826 | D | 0.72 | prob.delet. | None | None | None | None | N |
Y/L | 0.6611 | likely_pathogenic | 0.5954 | pathogenic | -1.584 | Destabilizing | 0.25 | N | 0.545 | neutral | None | None | None | None | N |
Y/M | 0.7402 | likely_pathogenic | 0.6328 | pathogenic | -1.331 | Destabilizing | 0.947 | D | 0.691 | prob.neutral | None | None | None | None | N |
Y/N | 0.4454 | ambiguous | 0.2986 | benign | -2.767 | Highly Destabilizing | 0.916 | D | 0.749 | deleterious | D | 0.697651335 | None | None | N |
Y/P | 0.9678 | likely_pathogenic | 0.9561 | pathogenic | -2.034 | Highly Destabilizing | 0.935 | D | 0.771 | deleterious | None | None | None | None | N |
Y/Q | 0.7592 | likely_pathogenic | 0.6213 | pathogenic | -2.548 | Highly Destabilizing | 0.935 | D | 0.729 | prob.delet. | None | None | None | None | N |
Y/R | 0.6569 | likely_pathogenic | 0.5572 | ambiguous | -1.81 | Destabilizing | 0.826 | D | 0.752 | deleterious | None | None | None | None | N |
Y/S | 0.5504 | ambiguous | 0.3942 | ambiguous | -3.223 | Highly Destabilizing | 0.781 | D | 0.721 | prob.delet. | D | 0.657870536 | None | None | N |
Y/T | 0.6862 | likely_pathogenic | 0.5349 | ambiguous | -2.933 | Highly Destabilizing | 0.826 | D | 0.723 | prob.delet. | None | None | None | None | N |
Y/V | 0.5476 | ambiguous | 0.4222 | ambiguous | -2.034 | Highly Destabilizing | 0.25 | N | 0.617 | neutral | None | None | None | None | N |
Y/W | 0.4742 | ambiguous | 0.3727 | ambiguous | -0.477 | Destabilizing | 0.947 | D | 0.608 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.