Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15086 | 45481;45482;45483 | chr2:178621568;178621567;178621566 | chr2:179486295;179486294;179486293 |
N2AB | 13445 | 40558;40559;40560 | chr2:178621568;178621567;178621566 | chr2:179486295;179486294;179486293 |
N2A | 12518 | 37777;37778;37779 | chr2:178621568;178621567;178621566 | chr2:179486295;179486294;179486293 |
N2B | 6021 | 18286;18287;18288 | chr2:178621568;178621567;178621566 | chr2:179486295;179486294;179486293 |
Novex-1 | 6146 | 18661;18662;18663 | chr2:178621568;178621567;178621566 | chr2:179486295;179486294;179486293 |
Novex-2 | 6213 | 18862;18863;18864 | chr2:178621568;178621567;178621566 | chr2:179486295;179486294;179486293 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/V | None | None | 0.141 | N | 0.444 | 0.116 | 0.542630587416 | gnomAD-4.0.0 | 1.59385E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86292E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.5657 | likely_pathogenic | 0.574 | pathogenic | -2.814 | Highly Destabilizing | 0.547 | D | 0.599 | neutral | None | None | None | None | N |
I/C | 0.7654 | likely_pathogenic | 0.7943 | pathogenic | -1.846 | Destabilizing | 0.985 | D | 0.709 | prob.delet. | None | None | None | None | N |
I/D | 0.8824 | likely_pathogenic | 0.8598 | pathogenic | -3.483 | Highly Destabilizing | 0.894 | D | 0.776 | deleterious | None | None | None | None | N |
I/E | 0.6959 | likely_pathogenic | 0.6914 | pathogenic | -3.219 | Highly Destabilizing | 0.894 | D | 0.773 | deleterious | None | None | None | None | N |
I/F | 0.1994 | likely_benign | 0.2139 | benign | -1.719 | Destabilizing | 0.928 | D | 0.641 | neutral | N | 0.509188538 | None | None | N |
I/G | 0.8171 | likely_pathogenic | 0.8154 | pathogenic | -3.357 | Highly Destabilizing | 0.894 | D | 0.747 | deleterious | None | None | None | None | N |
I/H | 0.5574 | ambiguous | 0.5841 | pathogenic | -2.9 | Highly Destabilizing | 0.995 | D | 0.785 | deleterious | None | None | None | None | N |
I/K | 0.5734 | likely_pathogenic | 0.5646 | pathogenic | -2.317 | Highly Destabilizing | 0.894 | D | 0.777 | deleterious | None | None | None | None | N |
I/L | 0.178 | likely_benign | 0.1791 | benign | -1.201 | Destabilizing | 0.273 | N | 0.446 | neutral | N | 0.501023868 | None | None | N |
I/M | 0.1345 | likely_benign | 0.1375 | benign | -1.084 | Destabilizing | 0.928 | D | 0.65 | neutral | N | 0.504190425 | None | None | N |
I/N | 0.3979 | ambiguous | 0.3618 | ambiguous | -2.814 | Highly Destabilizing | 0.864 | D | 0.781 | deleterious | N | 0.501023868 | None | None | N |
I/P | 0.9885 | likely_pathogenic | 0.9838 | pathogenic | -1.727 | Destabilizing | 0.945 | D | 0.801 | deleterious | None | None | None | None | N |
I/Q | 0.5533 | ambiguous | 0.5706 | pathogenic | -2.61 | Highly Destabilizing | 0.945 | D | 0.809 | deleterious | None | None | None | None | N |
I/R | 0.4645 | ambiguous | 0.4664 | ambiguous | -2.044 | Highly Destabilizing | 0.894 | D | 0.801 | deleterious | None | None | None | None | N |
I/S | 0.3994 | ambiguous | 0.3945 | ambiguous | -3.391 | Highly Destabilizing | 0.477 | N | 0.693 | prob.neutral | N | 0.473603554 | None | None | N |
I/T | 0.362 | ambiguous | 0.3496 | ambiguous | -2.995 | Highly Destabilizing | 0.006 | N | 0.449 | neutral | N | 0.467293968 | None | None | N |
I/V | 0.1176 | likely_benign | 0.1052 | benign | -1.727 | Destabilizing | 0.141 | N | 0.444 | neutral | N | 0.506989142 | None | None | N |
I/W | 0.7918 | likely_pathogenic | 0.81 | pathogenic | -2.21 | Highly Destabilizing | 0.995 | D | 0.753 | deleterious | None | None | None | None | N |
I/Y | 0.4513 | ambiguous | 0.4892 | ambiguous | -1.942 | Destabilizing | 0.945 | D | 0.741 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.