Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15089 | 45490;45491;45492 | chr2:178621559;178621558;178621557 | chr2:179486286;179486285;179486284 |
N2AB | 13448 | 40567;40568;40569 | chr2:178621559;178621558;178621557 | chr2:179486286;179486285;179486284 |
N2A | 12521 | 37786;37787;37788 | chr2:178621559;178621558;178621557 | chr2:179486286;179486285;179486284 |
N2B | 6024 | 18295;18296;18297 | chr2:178621559;178621558;178621557 | chr2:179486286;179486285;179486284 |
Novex-1 | 6149 | 18670;18671;18672 | chr2:178621559;178621558;178621557 | chr2:179486286;179486285;179486284 |
Novex-2 | 6216 | 18871;18872;18873 | chr2:178621559;178621558;178621557 | chr2:179486286;179486285;179486284 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/T | None | None | 0.989 | D | 0.757 | 0.747 | 0.901871528509 | gnomAD-4.0.0 | 1.59375E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43332E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.9617 | likely_pathogenic | 0.9559 | pathogenic | -2.937 | Highly Destabilizing | 0.992 | D | 0.688 | prob.neutral | None | None | None | None | N |
I/C | 0.9544 | likely_pathogenic | 0.9566 | pathogenic | -2.192 | Highly Destabilizing | 1.0 | D | 0.766 | deleterious | None | None | None | None | N |
I/D | 0.9976 | likely_pathogenic | 0.9967 | pathogenic | -3.6 | Highly Destabilizing | 1.0 | D | 0.867 | deleterious | None | None | None | None | N |
I/E | 0.9934 | likely_pathogenic | 0.9915 | pathogenic | -3.331 | Highly Destabilizing | 1.0 | D | 0.869 | deleterious | None | None | None | None | N |
I/F | 0.4327 | ambiguous | 0.396 | ambiguous | -1.776 | Destabilizing | 0.998 | D | 0.721 | prob.delet. | D | 0.73087708 | None | None | N |
I/G | 0.992 | likely_pathogenic | 0.9913 | pathogenic | -3.522 | Highly Destabilizing | 1.0 | D | 0.872 | deleterious | None | None | None | None | N |
I/H | 0.9779 | likely_pathogenic | 0.9734 | pathogenic | -2.993 | Highly Destabilizing | 1.0 | D | 0.857 | deleterious | None | None | None | None | N |
I/K | 0.9799 | likely_pathogenic | 0.9741 | pathogenic | -2.428 | Highly Destabilizing | 1.0 | D | 0.868 | deleterious | None | None | None | None | N |
I/L | 0.2762 | likely_benign | 0.2635 | benign | -1.207 | Destabilizing | 0.889 | D | 0.387 | neutral | D | 0.617138406 | None | None | N |
I/M | 0.304 | likely_benign | 0.2789 | benign | -1.143 | Destabilizing | 0.998 | D | 0.689 | prob.neutral | D | 0.758986935 | None | None | N |
I/N | 0.9612 | likely_pathogenic | 0.9517 | pathogenic | -2.938 | Highly Destabilizing | 0.999 | D | 0.878 | deleterious | D | 0.844697701 | None | None | N |
I/P | 0.9973 | likely_pathogenic | 0.9967 | pathogenic | -1.77 | Destabilizing | 1.0 | D | 0.871 | deleterious | None | None | None | None | N |
I/Q | 0.9796 | likely_pathogenic | 0.9744 | pathogenic | -2.737 | Highly Destabilizing | 1.0 | D | 0.883 | deleterious | None | None | None | None | N |
I/R | 0.9686 | likely_pathogenic | 0.9591 | pathogenic | -2.135 | Highly Destabilizing | 1.0 | D | 0.883 | deleterious | None | None | None | None | N |
I/S | 0.9562 | likely_pathogenic | 0.9471 | pathogenic | -3.591 | Highly Destabilizing | 0.998 | D | 0.849 | deleterious | D | 0.844697701 | None | None | N |
I/T | 0.9604 | likely_pathogenic | 0.9496 | pathogenic | -3.172 | Highly Destabilizing | 0.989 | D | 0.757 | deleterious | D | 0.844932823 | None | None | N |
I/V | 0.2317 | likely_benign | 0.2164 | benign | -1.77 | Destabilizing | 0.333 | N | 0.258 | neutral | D | 0.648577337 | None | None | N |
I/W | 0.9765 | likely_pathogenic | 0.9701 | pathogenic | -2.246 | Highly Destabilizing | 1.0 | D | 0.852 | deleterious | None | None | None | None | N |
I/Y | 0.9105 | likely_pathogenic | 0.9029 | pathogenic | -1.99 | Destabilizing | 1.0 | D | 0.766 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.