Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15101 | 45526;45527;45528 | chr2:178621523;178621522;178621521 | chr2:179486250;179486249;179486248 |
N2AB | 13460 | 40603;40604;40605 | chr2:178621523;178621522;178621521 | chr2:179486250;179486249;179486248 |
N2A | 12533 | 37822;37823;37824 | chr2:178621523;178621522;178621521 | chr2:179486250;179486249;179486248 |
N2B | 6036 | 18331;18332;18333 | chr2:178621523;178621522;178621521 | chr2:179486250;179486249;179486248 |
Novex-1 | 6161 | 18706;18707;18708 | chr2:178621523;178621522;178621521 | chr2:179486250;179486249;179486248 |
Novex-2 | 6228 | 18907;18908;18909 | chr2:178621523;178621522;178621521 | chr2:179486250;179486249;179486248 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/H | rs879050695 | None | 0.009 | N | 0.432 | 0.314 | None | gnomAD-4.0.0 | 3.42364E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 4.49981E-06 | 0 | 0 |
N/K | None | None | 0.379 | N | 0.651 | 0.377 | 0.256793551483 | gnomAD-4.0.0 | 2.40064E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.625E-06 | 0 | 0 |
N/S | None | None | 0.016 | N | 0.242 | 0.229 | 0.143124449307 | gnomAD-4.0.0 | 6.8472E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99947E-07 | 0 | 0 |
N/T | None | None | 0.007 | N | 0.237 | 0.177 | 0.212008924253 | gnomAD-4.0.0 | 6.8472E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99947E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.2527 | likely_benign | 0.2577 | benign | -1.895 | Destabilizing | 0.25 | N | 0.657 | neutral | None | None | None | None | N |
N/C | 0.2233 | likely_benign | 0.2729 | benign | -1.034 | Destabilizing | 0.992 | D | 0.769 | deleterious | None | None | None | None | N |
N/D | 0.2795 | likely_benign | 0.2181 | benign | -2.137 | Highly Destabilizing | 0.549 | D | 0.627 | neutral | D | 0.529115875 | None | None | N |
N/E | 0.5821 | likely_pathogenic | 0.5199 | ambiguous | -1.857 | Destabilizing | 0.617 | D | 0.644 | neutral | None | None | None | None | N |
N/F | 0.4246 | ambiguous | 0.4562 | ambiguous | -1.314 | Destabilizing | 0.92 | D | 0.805 | deleterious | None | None | None | None | N |
N/G | 0.4135 | ambiguous | 0.4175 | ambiguous | -2.276 | Highly Destabilizing | 0.25 | N | 0.607 | neutral | None | None | None | None | N |
N/H | 0.0946 | likely_benign | 0.1014 | benign | -1.435 | Destabilizing | 0.009 | N | 0.432 | neutral | N | 0.469611201 | None | None | N |
N/I | 0.1836 | likely_benign | 0.1797 | benign | -0.841 | Destabilizing | 0.81 | D | 0.792 | deleterious | N | 0.465068084 | None | None | N |
N/K | 0.5189 | ambiguous | 0.4595 | ambiguous | -0.471 | Destabilizing | 0.379 | N | 0.651 | neutral | N | 0.42959675 | None | None | N |
N/L | 0.2756 | likely_benign | 0.2693 | benign | -0.841 | Destabilizing | 0.447 | N | 0.75 | deleterious | None | None | None | None | N |
N/M | 0.3755 | ambiguous | 0.3922 | ambiguous | -0.703 | Destabilizing | 0.992 | D | 0.743 | deleterious | None | None | None | None | N |
N/P | 0.9715 | likely_pathogenic | 0.9581 | pathogenic | -1.172 | Destabilizing | 0.92 | D | 0.767 | deleterious | None | None | None | None | N |
N/Q | 0.4121 | ambiguous | 0.4031 | ambiguous | -1.047 | Destabilizing | 0.85 | D | 0.7 | prob.neutral | None | None | None | None | N |
N/R | 0.4347 | ambiguous | 0.4046 | ambiguous | -0.555 | Destabilizing | 0.617 | D | 0.667 | neutral | None | None | None | None | N |
N/S | 0.0712 | likely_benign | 0.0737 | benign | -1.61 | Destabilizing | 0.016 | N | 0.242 | neutral | N | 0.30086263 | None | None | N |
N/T | 0.1199 | likely_benign | 0.1231 | benign | -1.149 | Destabilizing | 0.007 | N | 0.237 | neutral | N | 0.27285123 | None | None | N |
N/V | 0.2107 | likely_benign | 0.2213 | benign | -1.172 | Destabilizing | 0.447 | N | 0.753 | deleterious | None | None | None | None | N |
N/W | 0.793 | likely_pathogenic | 0.8129 | pathogenic | -1.129 | Destabilizing | 0.992 | D | 0.785 | deleterious | None | None | None | None | N |
N/Y | 0.1532 | likely_benign | 0.1663 | benign | -0.867 | Destabilizing | 0.81 | D | 0.766 | deleterious | N | 0.467043292 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.