Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15124 | 45595;45596;45597 | chr2:178621348;178621347;178621346 | chr2:179486075;179486074;179486073 |
N2AB | 13483 | 40672;40673;40674 | chr2:178621348;178621347;178621346 | chr2:179486075;179486074;179486073 |
N2A | 12556 | 37891;37892;37893 | chr2:178621348;178621347;178621346 | chr2:179486075;179486074;179486073 |
N2B | 6059 | 18400;18401;18402 | chr2:178621348;178621347;178621346 | chr2:179486075;179486074;179486073 |
Novex-1 | 6184 | 18775;18776;18777 | chr2:178621348;178621347;178621346 | chr2:179486075;179486074;179486073 |
Novex-2 | 6251 | 18976;18977;18978 | chr2:178621348;178621347;178621346 | chr2:179486075;179486074;179486073 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | None | None | 0.007 | N | 0.109 | 0.053 | 0.194818534648 | gnomAD-4.0.0 | 1.59693E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86466E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0822 | likely_benign | 0.0791 | benign | -0.582 | Destabilizing | 0.007 | N | 0.109 | neutral | N | 0.488570868 | None | None | N |
S/C | 0.1896 | likely_benign | 0.1703 | benign | -0.381 | Destabilizing | 0.992 | D | 0.355 | neutral | None | None | None | None | N |
S/D | 0.5494 | ambiguous | 0.5662 | pathogenic | 0.224 | Stabilizing | 0.617 | D | 0.312 | neutral | None | None | None | None | N |
S/E | 0.5641 | likely_pathogenic | 0.5775 | pathogenic | 0.197 | Stabilizing | 0.617 | D | 0.319 | neutral | None | None | None | None | N |
S/F | 0.2887 | likely_benign | 0.2893 | benign | -0.908 | Destabilizing | 0.92 | D | 0.453 | neutral | None | None | None | None | N |
S/G | 0.1547 | likely_benign | 0.146 | benign | -0.794 | Destabilizing | 0.25 | N | 0.337 | neutral | None | None | None | None | N |
S/H | 0.4771 | ambiguous | 0.4657 | ambiguous | -1.236 | Destabilizing | 0.972 | D | 0.361 | neutral | None | None | None | None | N |
S/I | 0.2448 | likely_benign | 0.2639 | benign | -0.14 | Destabilizing | 0.739 | D | 0.423 | neutral | None | None | None | None | N |
S/K | 0.7766 | likely_pathogenic | 0.7912 | pathogenic | -0.537 | Destabilizing | 0.447 | N | 0.335 | neutral | None | None | None | None | N |
S/L | 0.1264 | likely_benign | 0.1272 | benign | -0.14 | Destabilizing | 0.379 | N | 0.422 | neutral | N | 0.504011078 | None | None | N |
S/M | 0.2511 | likely_benign | 0.2424 | benign | 0.026 | Stabilizing | 0.92 | D | 0.364 | neutral | None | None | None | None | N |
S/N | 0.2023 | likely_benign | 0.1998 | benign | -0.432 | Destabilizing | 0.617 | D | 0.329 | neutral | None | None | None | None | N |
S/P | 0.9181 | likely_pathogenic | 0.9228 | pathogenic | -0.254 | Destabilizing | 0.896 | D | 0.357 | neutral | D | 0.601225419 | None | None | N |
S/Q | 0.5483 | ambiguous | 0.5423 | ambiguous | -0.555 | Destabilizing | 0.85 | D | 0.36 | neutral | None | None | None | None | N |
S/R | 0.6952 | likely_pathogenic | 0.7149 | pathogenic | -0.435 | Destabilizing | 0.005 | N | 0.216 | neutral | None | None | None | None | N |
S/T | 0.081 | likely_benign | 0.0812 | benign | -0.491 | Destabilizing | 0.002 | N | 0.108 | neutral | N | 0.463668937 | None | None | N |
S/V | 0.2235 | likely_benign | 0.2296 | benign | -0.254 | Destabilizing | 0.447 | N | 0.42 | neutral | None | None | None | None | N |
S/W | 0.552 | ambiguous | 0.5538 | ambiguous | -0.902 | Destabilizing | 0.992 | D | 0.513 | neutral | None | None | None | None | N |
S/Y | 0.286 | likely_benign | 0.2829 | benign | -0.624 | Destabilizing | 0.972 | D | 0.45 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.