Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15131 | 45616;45617;45618 | chr2:178621327;178621326;178621325 | chr2:179486054;179486053;179486052 |
N2AB | 13490 | 40693;40694;40695 | chr2:178621327;178621326;178621325 | chr2:179486054;179486053;179486052 |
N2A | 12563 | 37912;37913;37914 | chr2:178621327;178621326;178621325 | chr2:179486054;179486053;179486052 |
N2B | 6066 | 18421;18422;18423 | chr2:178621327;178621326;178621325 | chr2:179486054;179486053;179486052 |
Novex-1 | 6191 | 18796;18797;18798 | chr2:178621327;178621326;178621325 | chr2:179486054;179486053;179486052 |
Novex-2 | 6258 | 18997;18998;18999 | chr2:178621327;178621326;178621325 | chr2:179486054;179486053;179486052 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/V | None | None | None | N | 0.119 | 0.186 | 0.300449992093 | gnomAD-4.0.0 | 4.78689E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.59126E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.5548 | ambiguous | 0.5427 | ambiguous | -2.233 | Highly Destabilizing | 0.035 | N | 0.355 | neutral | None | None | None | None | I |
I/C | 0.7554 | likely_pathogenic | 0.7708 | pathogenic | -1.474 | Destabilizing | 0.824 | D | 0.454 | neutral | None | None | None | None | I |
I/D | 0.9552 | likely_pathogenic | 0.9579 | pathogenic | -1.955 | Destabilizing | 0.555 | D | 0.554 | neutral | None | None | None | None | I |
I/E | 0.9109 | likely_pathogenic | 0.9177 | pathogenic | -1.84 | Destabilizing | 0.555 | D | 0.555 | neutral | None | None | None | None | I |
I/F | 0.3734 | ambiguous | 0.3945 | ambiguous | -1.336 | Destabilizing | 0.38 | N | 0.443 | neutral | None | None | None | None | I |
I/G | 0.8726 | likely_pathogenic | 0.8647 | pathogenic | -2.673 | Highly Destabilizing | 0.262 | N | 0.531 | neutral | None | None | None | None | I |
I/H | 0.8631 | likely_pathogenic | 0.8775 | pathogenic | -1.902 | Destabilizing | 0.935 | D | 0.511 | neutral | None | None | None | None | I |
I/K | 0.7449 | likely_pathogenic | 0.748 | pathogenic | -1.562 | Destabilizing | 0.484 | N | 0.559 | neutral | N | 0.49915972 | None | None | I |
I/L | 0.1731 | likely_benign | 0.1967 | benign | -1.021 | Destabilizing | 0.005 | N | 0.266 | neutral | N | 0.490812596 | None | None | I |
I/M | 0.1622 | likely_benign | 0.1737 | benign | -0.931 | Destabilizing | 0.317 | N | 0.479 | neutral | D | 0.535856421 | None | None | I |
I/N | 0.658 | likely_pathogenic | 0.6617 | pathogenic | -1.569 | Destabilizing | 0.791 | D | 0.539 | neutral | None | None | None | None | I |
I/P | 0.9804 | likely_pathogenic | 0.9807 | pathogenic | -1.4 | Destabilizing | 0.555 | D | 0.554 | neutral | None | None | None | None | I |
I/Q | 0.8135 | likely_pathogenic | 0.8298 | pathogenic | -1.619 | Destabilizing | 0.791 | D | 0.539 | neutral | None | None | None | None | I |
I/R | 0.6819 | likely_pathogenic | 0.6848 | pathogenic | -1.097 | Destabilizing | 0.484 | N | 0.539 | neutral | N | 0.499339787 | None | None | I |
I/S | 0.5995 | likely_pathogenic | 0.5891 | pathogenic | -2.285 | Highly Destabilizing | 0.149 | N | 0.473 | neutral | None | None | None | None | I |
I/T | 0.3647 | ambiguous | 0.3635 | ambiguous | -2.047 | Highly Destabilizing | 0.062 | N | 0.386 | neutral | N | 0.451361076 | None | None | I |
I/V | 0.0792 | likely_benign | 0.0764 | benign | -1.4 | Destabilizing | None | N | 0.119 | neutral | N | 0.337114229 | None | None | I |
I/W | 0.9593 | likely_pathogenic | 0.9642 | pathogenic | -1.536 | Destabilizing | 0.935 | D | 0.553 | neutral | None | None | None | None | I |
I/Y | 0.808 | likely_pathogenic | 0.8141 | pathogenic | -1.299 | Destabilizing | 0.555 | D | 0.493 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.