Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15148 | 45667;45668;45669 | chr2:178621276;178621275;178621274 | chr2:179486003;179486002;179486001 |
N2AB | 13507 | 40744;40745;40746 | chr2:178621276;178621275;178621274 | chr2:179486003;179486002;179486001 |
N2A | 12580 | 37963;37964;37965 | chr2:178621276;178621275;178621274 | chr2:179486003;179486002;179486001 |
N2B | 6083 | 18472;18473;18474 | chr2:178621276;178621275;178621274 | chr2:179486003;179486002;179486001 |
Novex-1 | 6208 | 18847;18848;18849 | chr2:178621276;178621275;178621274 | chr2:179486003;179486002;179486001 |
Novex-2 | 6275 | 19048;19049;19050 | chr2:178621276;178621275;178621274 | chr2:179486003;179486002;179486001 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/I | None | None | 0.012 | N | 0.167 | 0.224 | 0.29132392195 | gnomAD-4.0.0 | 1.59449E-06 | None | None | None | None | N | None | 0 | 2.29421E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/A | 0.6826 | likely_pathogenic | 0.6314 | pathogenic | -1.988 | Destabilizing | 0.688 | D | 0.423 | neutral | None | None | None | None | N |
F/C | 0.5925 | likely_pathogenic | 0.4701 | ambiguous | -0.924 | Destabilizing | 0.997 | D | 0.529 | neutral | N | 0.502028615 | None | None | N |
F/D | 0.8974 | likely_pathogenic | 0.8422 | pathogenic | -0.302 | Destabilizing | 0.991 | D | 0.584 | neutral | None | None | None | None | N |
F/E | 0.8999 | likely_pathogenic | 0.8421 | pathogenic | -0.226 | Destabilizing | 0.974 | D | 0.595 | neutral | None | None | None | None | N |
F/G | 0.8995 | likely_pathogenic | 0.8547 | pathogenic | -2.306 | Highly Destabilizing | 0.915 | D | 0.597 | neutral | None | None | None | None | N |
F/H | 0.7052 | likely_pathogenic | 0.6429 | pathogenic | -0.519 | Destabilizing | 0.949 | D | 0.523 | neutral | None | None | None | None | N |
F/I | 0.2713 | likely_benign | 0.2094 | benign | -1.049 | Destabilizing | 0.012 | N | 0.167 | neutral | N | 0.448589577 | None | None | N |
F/K | 0.9382 | likely_pathogenic | 0.9066 | pathogenic | -0.949 | Destabilizing | 0.974 | D | 0.599 | neutral | None | None | None | None | N |
F/L | 0.8766 | likely_pathogenic | 0.8168 | pathogenic | -1.049 | Destabilizing | 0.005 | N | 0.113 | neutral | N | 0.454036621 | None | None | N |
F/M | 0.6053 | likely_pathogenic | 0.5238 | ambiguous | -0.783 | Destabilizing | 0.949 | D | 0.481 | neutral | None | None | None | None | N |
F/N | 0.7563 | likely_pathogenic | 0.6904 | pathogenic | -0.954 | Destabilizing | 0.991 | D | 0.585 | neutral | None | None | None | None | N |
F/P | 0.9882 | likely_pathogenic | 0.98 | pathogenic | -1.353 | Destabilizing | 0.991 | D | 0.587 | neutral | None | None | None | None | N |
F/Q | 0.8568 | likely_pathogenic | 0.8121 | pathogenic | -1.02 | Destabilizing | 0.991 | D | 0.59 | neutral | None | None | None | None | N |
F/R | 0.8993 | likely_pathogenic | 0.8612 | pathogenic | -0.328 | Destabilizing | 0.974 | D | 0.587 | neutral | None | None | None | None | N |
F/S | 0.5459 | ambiguous | 0.4989 | ambiguous | -1.795 | Destabilizing | 0.891 | D | 0.532 | neutral | N | 0.465506486 | None | None | N |
F/T | 0.6502 | likely_pathogenic | 0.5637 | ambiguous | -1.63 | Destabilizing | 0.842 | D | 0.528 | neutral | None | None | None | None | N |
F/V | 0.2707 | likely_benign | 0.2188 | benign | -1.353 | Destabilizing | 0.454 | N | 0.387 | neutral | N | 0.410521107 | None | None | N |
F/W | 0.7617 | likely_pathogenic | 0.7089 | pathogenic | -0.184 | Destabilizing | 0.974 | D | 0.479 | neutral | None | None | None | None | N |
F/Y | 0.2148 | likely_benign | 0.194 | benign | -0.395 | Destabilizing | 0.005 | N | 0.116 | neutral | N | 0.426398598 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.