Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15162 | 45709;45710;45711 | chr2:178621234;178621233;178621232 | chr2:179485961;179485960;179485959 |
N2AB | 13521 | 40786;40787;40788 | chr2:178621234;178621233;178621232 | chr2:179485961;179485960;179485959 |
N2A | 12594 | 38005;38006;38007 | chr2:178621234;178621233;178621232 | chr2:179485961;179485960;179485959 |
N2B | 6097 | 18514;18515;18516 | chr2:178621234;178621233;178621232 | chr2:179485961;179485960;179485959 |
Novex-1 | 6222 | 18889;18890;18891 | chr2:178621234;178621233;178621232 | chr2:179485961;179485960;179485959 |
Novex-2 | 6289 | 19090;19091;19092 | chr2:178621234;178621233;178621232 | chr2:179485961;179485960;179485959 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/E | None | None | 0.999 | N | 0.7 | 0.304 | 0.322510055762 | gnomAD-4.0.0 | 1.59429E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 1.88466E-05 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | 0.2005 | likely_benign | 0.1842 | benign | -0.241 | Destabilizing | 0.999 | D | 0.54 | neutral | D | 0.52643287 | None | None | N |
G/C | 0.3773 | ambiguous | 0.2993 | benign | -0.851 | Destabilizing | 1.0 | D | 0.751 | deleterious | None | None | None | None | N |
G/D | 0.2102 | likely_benign | 0.1859 | benign | -0.47 | Destabilizing | 0.852 | D | 0.518 | neutral | None | None | None | None | N |
G/E | 0.3486 | ambiguous | 0.3013 | benign | -0.632 | Destabilizing | 0.999 | D | 0.7 | prob.neutral | N | 0.467257779 | None | None | N |
G/F | 0.8237 | likely_pathogenic | 0.7555 | pathogenic | -0.98 | Destabilizing | 1.0 | D | 0.761 | deleterious | None | None | None | None | N |
G/H | 0.6081 | likely_pathogenic | 0.4992 | ambiguous | -0.463 | Destabilizing | 1.0 | D | 0.713 | prob.delet. | None | None | None | None | N |
G/I | 0.5951 | likely_pathogenic | 0.5344 | ambiguous | -0.396 | Destabilizing | 1.0 | D | 0.758 | deleterious | None | None | None | None | N |
G/K | 0.5682 | likely_pathogenic | 0.4624 | ambiguous | -0.717 | Destabilizing | 1.0 | D | 0.709 | prob.delet. | None | None | None | None | N |
G/L | 0.6565 | likely_pathogenic | 0.575 | pathogenic | -0.396 | Destabilizing | 1.0 | D | 0.751 | deleterious | None | None | None | None | N |
G/M | 0.7138 | likely_pathogenic | 0.6441 | pathogenic | -0.454 | Destabilizing | 1.0 | D | 0.747 | deleterious | None | None | None | None | N |
G/N | 0.2934 | likely_benign | 0.2557 | benign | -0.373 | Destabilizing | 1.0 | D | 0.637 | neutral | None | None | None | None | N |
G/P | 0.9533 | likely_pathogenic | 0.9324 | pathogenic | -0.312 | Destabilizing | 1.0 | D | 0.732 | prob.delet. | None | None | None | None | N |
G/Q | 0.5072 | ambiguous | 0.4171 | ambiguous | -0.651 | Destabilizing | 1.0 | D | 0.739 | prob.delet. | None | None | None | None | N |
G/R | 0.4534 | ambiguous | 0.3643 | ambiguous | -0.284 | Destabilizing | 1.0 | D | 0.74 | deleterious | D | 0.540278595 | None | None | N |
G/S | 0.0996 | likely_benign | 0.094 | benign | -0.527 | Destabilizing | 1.0 | D | 0.602 | neutral | None | None | None | None | N |
G/T | 0.1854 | likely_benign | 0.1737 | benign | -0.616 | Destabilizing | 1.0 | D | 0.703 | prob.neutral | None | None | None | None | N |
G/V | 0.4043 | ambiguous | 0.3593 | ambiguous | -0.312 | Destabilizing | 1.0 | D | 0.757 | deleterious | D | 0.582718623 | None | None | N |
G/W | 0.7093 | likely_pathogenic | 0.6132 | pathogenic | -1.127 | Destabilizing | 1.0 | D | 0.732 | prob.delet. | None | None | None | None | N |
G/Y | 0.7464 | likely_pathogenic | 0.6776 | pathogenic | -0.775 | Destabilizing | 1.0 | D | 0.741 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.