Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 15165 | 45718;45719;45720 | chr2:178621225;178621224;178621223 | chr2:179485952;179485951;179485950 |
N2AB | 13524 | 40795;40796;40797 | chr2:178621225;178621224;178621223 | chr2:179485952;179485951;179485950 |
N2A | 12597 | 38014;38015;38016 | chr2:178621225;178621224;178621223 | chr2:179485952;179485951;179485950 |
N2B | 6100 | 18523;18524;18525 | chr2:178621225;178621224;178621223 | chr2:179485952;179485951;179485950 |
Novex-1 | 6225 | 18898;18899;18900 | chr2:178621225;178621224;178621223 | chr2:179485952;179485951;179485950 |
Novex-2 | 6292 | 19099;19100;19101 | chr2:178621225;178621224;178621223 | chr2:179485952;179485951;179485950 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/C | None | None | 1.0 | D | 0.8 | 0.535 | 0.630178222335 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 6.07533E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/A | 0.9299 | likely_pathogenic | 0.9059 | pathogenic | -3.025 | Highly Destabilizing | 0.996 | D | 0.646 | neutral | None | None | None | None | N |
Y/C | 0.4757 | ambiguous | 0.4594 | ambiguous | -1.932 | Destabilizing | 1.0 | D | 0.8 | deleterious | D | 0.706220021 | None | None | N |
Y/D | 0.9443 | likely_pathogenic | 0.9212 | pathogenic | -2.747 | Highly Destabilizing | 0.998 | D | 0.813 | deleterious | D | 0.743986195 | None | None | N |
Y/E | 0.9691 | likely_pathogenic | 0.9595 | pathogenic | -2.585 | Highly Destabilizing | 0.998 | D | 0.721 | prob.delet. | None | None | None | None | N |
Y/F | 0.1704 | likely_benign | 0.1618 | benign | -1.207 | Destabilizing | 0.994 | D | 0.495 | neutral | N | 0.505562642 | None | None | N |
Y/G | 0.9166 | likely_pathogenic | 0.8962 | pathogenic | -3.43 | Highly Destabilizing | 0.999 | D | 0.757 | deleterious | None | None | None | None | N |
Y/H | 0.6329 | likely_pathogenic | 0.561 | ambiguous | -1.893 | Destabilizing | 0.391 | N | 0.343 | neutral | D | 0.580528872 | None | None | N |
Y/I | 0.7334 | likely_pathogenic | 0.7152 | pathogenic | -1.714 | Destabilizing | 1.0 | D | 0.791 | deleterious | None | None | None | None | N |
Y/K | 0.9642 | likely_pathogenic | 0.9556 | pathogenic | -2.091 | Highly Destabilizing | 0.999 | D | 0.765 | deleterious | None | None | None | None | N |
Y/L | 0.7495 | likely_pathogenic | 0.7395 | pathogenic | -1.714 | Destabilizing | 0.996 | D | 0.606 | neutral | None | None | None | None | N |
Y/M | 0.8613 | likely_pathogenic | 0.8383 | pathogenic | -1.472 | Destabilizing | 1.0 | D | 0.779 | deleterious | None | None | None | None | N |
Y/N | 0.7218 | likely_pathogenic | 0.6756 | pathogenic | -2.701 | Highly Destabilizing | 0.997 | D | 0.775 | deleterious | D | 0.706309319 | None | None | N |
Y/P | 0.9935 | likely_pathogenic | 0.9904 | pathogenic | -2.159 | Highly Destabilizing | 1.0 | D | 0.843 | deleterious | None | None | None | None | N |
Y/Q | 0.9502 | likely_pathogenic | 0.936 | pathogenic | -2.528 | Highly Destabilizing | 0.999 | D | 0.801 | deleterious | None | None | None | None | N |
Y/R | 0.9128 | likely_pathogenic | 0.8941 | pathogenic | -1.69 | Destabilizing | 0.999 | D | 0.786 | deleterious | None | None | None | None | N |
Y/S | 0.8553 | likely_pathogenic | 0.8179 | pathogenic | -3.172 | Highly Destabilizing | 0.998 | D | 0.733 | prob.delet. | D | 0.666530952 | None | None | N |
Y/T | 0.8711 | likely_pathogenic | 0.8301 | pathogenic | -2.893 | Highly Destabilizing | 1.0 | D | 0.771 | deleterious | None | None | None | None | N |
Y/V | 0.6452 | likely_pathogenic | 0.6188 | pathogenic | -2.159 | Highly Destabilizing | 1.0 | D | 0.701 | prob.neutral | None | None | None | None | N |
Y/W | 0.6171 | likely_pathogenic | 0.5735 | pathogenic | -0.622 | Destabilizing | 1.0 | D | 0.723 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.